Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0915 ATGGCGGAGAAAGCATGCATCAAGCGTCTTCAGAAGGAGTATAGAGCCCTTTGTAAAGAGCCAGTTTCCCATATTGTTGCTCGTCCTTCACCAAGTGATATTCTTGAGTGGCATTATGTATTGGAAGGAAGCGAGGGAACACCTTTCTCAGGTGGATATTACTATGGAAAGATCAAGTTTCCTCCAGAATATCCATACAAACCACCTGGAATCAGCATGACAACACCTAATGGGCGGTTCATGACACAGAAAAAGATCTGTTTGTCAATGAGCGATTTTCATCCTGAAAGTTGGAATCCAATGTGGTCTGTATCAAGCATACTCACCGGGCTTCTTTCATTCATGATGGACACGAGTCCAACCACTGGAAGTGTAAACACCACTACTGCTGAGAAACAGCGTCTAGCAAAATCGTCAATGTCTTTCAATTGTAAGAATGCAACTTTCAGGAAAATGTTCCCCGAGTACGTGGAGAAGTACACCCAGCAGCAGCTTTCTGAGCAAGTTGCTTCTGAGCAGCGGGCGCCATCAGAGACTAGTCAAGATAAAAGTCCAAGGTCTGTTTTGGAAAACAATTTAGAGTCCACAGGAGAAGACATGAAAAGGGTTGAGGGATTGAAGGACGTGAGGAGAAACAGAAAACAAGGATTTCCAACTTGGGTGATGTTATTACTCTTCTCCATCTTTGGGGTTGTTATGGCATTACCTCTACTCCAGTTGTGA 723 0.4385 MAEKACIKRLQKEYRALCKEPVSHIVARPSPSDILEWHYVLEGSEGTPFSGGYYYGKIKFPPEYPYKPPGISMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTTGSVNTTTAEKQRLAKSSMSFNCKNATFRKMFPEYVEKYTQQQLSEQVASEQRAPSETSQDKSPRSVLENNLESTGEDMKRVEGLKDVRRNRKQGFPTWVMLLLFSIFGVVMALPLLQL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0915 240 CDD UBCc 7 157 IPR000608 -
Mal5g0915 240 Pfam Ubiquitin-conjugating enzyme 9 132 IPR000608 -
Mal5g0915 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 3 240 - -
Mal5g0915 240 SMART ubc_7 8 162 - -
Mal5g0915 240 MobiDBLite consensus disorder prediction 167 194 - -
Mal5g0915 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Mal5g0915 240 SUPERFAMILY UBC-like 6 156 IPR016135 -
Mal5g0915 240 MobiDBLite consensus disorder prediction 167 199 - -
Mal5g0915 240 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Mal5g0915 240 PANTHER BNAA06G11590D PROTEIN 3 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0915 Mal-Chr5 15838532 15841026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0915 1 240 Miscellaneous Gene Families AT1G17280 76.667 1.28e-139 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0915 K04554 - gmx:100778181 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0915 5 15838532 15841026 Mal5g0915 5 15838532 15841026 ECH