Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0899 ATGGGCAAAGTTCATCCCCAAGCAATAGTTTCTTCTAGTACTAGCAATTTCACTTCCAAGCAAGAAACTTTCACCCTATGGATGAAATCTCTTGTATTGAATGGAAAAGGATGTACCGTCTTTGATTCCAATGGTCAAATTGCATATAGAGTTGATAACTACAACTCAAATCATAGAGATCAAGTTTATCTCATGGATCAAAGAGGAAGTACTTTGTTTACTATACTTAAAAAGCAATATAAATTGTCGAGGTTTTGGGAGGGTTACAAACTTCCGGCGACAAGGAACGACCAGAAAGGACCATGCTTTCGAGTTGGTAAAACTTATAGCATCTCTAAATGGGATTCAAGTTATGAAGTTGAACTTGGAATGGACAAAAATCAACCATATAGTTATAAAATTGAAAGCAACACTTGCAAGCCAGCTTGCAAAATAATGGACAAGTTTGGAGTGATAGTTGCAGAGCTAAGGAGAAAGAAGTCAACTTGTGGAATTGATTTAGGAGATGATGTTTTCACAATGGTGGTGGAGCCAAATATTGATCTTTCTCTAATCATGGGAGTTGTTGTAGCTTATAGCCTTATTCAAAGTAAAATGTAA 600 0.3617 MGKVHPQAIVSSSTSNFTSKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNSNHRDQVYLMDQRGSTLFTILKKQYKLSRFWEGYKLPATRNDQKGPCFRVGKTYSISKWDSSYEVELGMDKNQPYSYKIESNTCKPACKIMDKFGVIVAELRRKKSTCGIDLGDDVFTMVVEPNIDLSLIMGVVVAYSLIQSKM* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0899 199 PANTHER - 2 198 IPR007612 -
Mal5g0899 199 PANTHER PROTEIN LURP-ONE-RELATED 11 2 198 - -
Mal5g0899 199 Gene3D - 12 198 IPR038595 -
Mal5g0899 199 Pfam LURP-one-related 15 190 IPR007612 -
Mal5g0899 199 SUPERFAMILY Tubby C-terminal domain-like 16 195 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0899 Mal-Chr5 15687246 15688246 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0899 - - gmx:100820270 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0899 5 15687246 15688246 Mal5g0899 5 15687246 15688246 ECH