Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0824 ATGACTTTGTTTGACATGGATTTGAGTGGTGTAGTGAACAATCTGCTCAATCATGTTCATGAAACACCTTTTAGGGATCATGAGACTCATGAGAGTAGAAGGGCTTCTAATATCCCAGTGGATATTTTGGATACTCCTAAGGAGTATATATTTTTCATGGATGTTCCTGGTCTCTCCAAATCTGAAATTCAGGTGACAATTGAAGATGAGAACACACTTGTAATTAAGAGCAATGGAAAAAGAAAAAGGCAAGATGGTGACGATGAAGGCTGCAAGTACCTTAGGTTGGAAAGGAGAGCACCTCAGAAATTGCTGAGGAAGTTCCGTTTGCCAGAGAATGCAAATGTGTCAGCAATCAGTGCTAAATGTGAGCATGGTGTTCTGATTGTGACTGTAGAGAAGCACACTCCACCACCAAAATCAAAAACAGTTGAAGTTTCCATTGCCTAA 450 0.4022 MTLFDMDLSGVVNNLLNHVHETPFRDHETHESRRASNIPVDILDTPKEYIFFMDVPGLSKSEIQVTIEDENTLVIKSNGKRKRQDGDDEGCKYLRLERRAPQKLLRKFRLPENANVSAISAKCEHGVLIVTVEKHTPPPKSKTVEVSIA* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0824 149 CDD ACD_sHsps-like 41 134 - -
Mal5g0824 149 Gene3D - 4 148 IPR008978 -
Mal5g0824 149 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 26 149 - -
Mal5g0824 149 Pfam Hsp20/alpha crystallin family 41 147 IPR002068 -
Mal5g0824 149 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 31 149 IPR002068 -
Mal5g0824 149 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 26 149 - -
Mal5g0824 149 SUPERFAMILY HSP20-like chaperones 23 142 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0824 Mal-Chr5 13674379 13675149 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0824 K13993 - vvi:100244609 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0824 5 13674379 13675149 Mal5g0824 5 13674379 13675149 ECH