Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0803 ATGGTGAAGTTGACTATGATTGCCCGTGTTACTGATGGTCTTCCATTGGCTGAAGGACTGGATGATGGTCGCGATATTAAAGATGGTGAATTATACAAACAGCAAGTCAAGTCTCTGTTTAAGAATCTATCAAGAGGGCATAATGAGGCATCCAGGATGTCAGTTGAAAGTGGTCCTTATGTTTTCCATTATATTATAGAAGGACGAGTCTGTTACTTGACAATGTGTGACCGGGCATACCCCAAGAAACTAGCATTTCAATATCTTGAAGAGCTCAGGAATGAGTTTGAGCGTACTAATGGGTCTCAAATTGAAACTGCTGCCAGACCTTATGCCTTCATTAAGTTTGACACATTTATACAGAAGACAAAGAAACTTTACCAGGATACCCATACACAGCGCAATATTGCAAAGTTGAATGATGAACTTTATGAAGTCCATCAGATTATGACTCGAAATGTGCAGGAAGTTCTTGGTGTTGGTGAACAGTTGGATCAGGTCAGCCAGTTGTCCAGTCGCTTATCATCAGAATCTCGCATATATGCTGACAAGGCTAGAGATTTAAATAGACAGGCTCTGATTCGGAAATGGGCCCCCGTTGCTATTGTTTTTGGAGTTGTCTTTGTACTTTTCTGGCTCAAGAACAAAATTTGGTGA 657 0.4079 MVKLTMIARVTDGLPLAEGLDDGRDIKDGELYKQQVKSLFKNLSRGHNEASRMSVESGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEELRNEFERTNGSQIETAARPYAFIKFDTFIQKTKKLYQDTHTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEQLDQVSQLSSRLSSESRIYADKARDLNRQALIRKWAPVAIVFGVVFVLFWLKNKIW* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0803 218 PANTHER VESICLE-TRAFFICKING PROTEIN SEC22B 1 218 IPR044565 GO:0005484|GO:0006888|GO:0006890
Mal5g0803 218 Gene3D Longin domain 1 127 - -
Mal5g0803 218 SUPERFAMILY SNARE-like 1 128 IPR011012 -
Mal5g0803 218 ProSiteProfiles Longin domain profile. 6 120 IPR010908 -
Mal5g0803 218 PANTHER BNAA09G47480D PROTEIN 1 218 - -
Mal5g0803 218 Gene3D - 131 214 - -
Mal5g0803 218 Pfam Synaptobrevin 133 213 IPR042855 -
Mal5g0803 218 CDD Longin 5 127 IPR010908 -
Mal5g0803 218 SMART Longin_2 35 119 IPR010908 -
Mal5g0803 218 CDD R-SNARE_SEC22 133 196 - -
Mal5g0803 218 SUPERFAMILY SNARE fusion complex 130 197 - -
Mal5g0803 218 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 135 195 IPR042855 -
Mal5g0803 218 Pfam Regulated-SNARE-like domain 37 118 IPR010908 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0803 46 210 Miscellaneous Gene Families AT5G11150 21.818 3.69e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0803 K08517 - gmx:100795552 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0803 5 13224320 13229541 Mal5g0803 5 13224320 13229541 ECH