Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0758 ATGGCCCTAACAAATGAAATCATGGGTTCTTCATTGATAGAAAGATCATTATTTCCTTCTTCTTCACCATGTTTTCAACAGAAGAATGGTAGATTCTTGATCAATCCTGTTTTGGTTCCTTTTGGAAACAAAAGAGTTGTGAGGTTGAGAAAATCTGCTAAGTTTCCTGTTGCAGCTATCAGTGAAGATTTGGTGAAAGGCTCTTCATCTTCTTCTGTGTCATCTTCTTCATCTTCTTCTTCTGTACCTGCTGAAAAACCAGTGAAATTTAAGGTTAGAGCTGTTGTGACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACTTTTGTGAAACATCTTGATGCTTTAACTGATAGGATTGGAAGAAATGTTGTTCTTGAACTTTTTAGCACTGAAATTGATCCAAAAACAAAAGCTGCAAAGAAGACTAATGAAGCAGTGTTGAAGGATTGGTCAAAGAAGACTAATATTAAGGCAGAGAGAGTTAATTACACAGCTGAATTTACAGTTGACTCAAATTTTGGAGAACCAGGAGCTATTACTGTGATAAACAATCATCAGAAAGAATTTTACTTAGAAAATATAACCATTGAAGGATTTGCTACTGGAGCATTTCATTTTCCTTGTAATTCTTGGGTTCAAGCTAGAAAAGATCTTCCTGGAAAGAGAATTTTCTTTTCTAATAAGGCTTATTTACCGGATGATACACCTGCTGGGATTAAACTTTTGAGGGAGAAAGACCTAAAAAATCTGAGAGGTGATGGAAAAGGAGTTAGAAAATTATCTGACAGAATTTATGATTATGATACATACAATGATCTTGGAAACCCAGATAGAGGAATTGATCTTGCTAGACCAACTCTTGGAGGTTCTGAAATGTATCCATACCCACGACGGTGTCGTACCGGCCGTGAACCATCTGATACAGATATTACTTGTGAGAGTCGTGTGGAGAAGCCACTTCCAATGTATATTCCAAGAGATGAAAGATTTGAGGAATCAAAAATGAACACATTTTCAGTGAAGAGGCTCAAAGGAGTGCTCCATAATTTGCTTCCTGGTCTTAAATCAAGTCTTTCTGCTCAAAACAAAGATTTCAATGAATTCACAGATGTTGATGGCCTTTATAGTGTTGGGCTACTCATTAAGTTGGGTTTGCAAGATGATATTTTGAAGAAACTCCCATTGCCTCACATTGTTAGCAAGATCCAAGAATCCACTAGCCAGGGAATACTTAAGTATGACATTCCCAAGATTATATCAAAGGATAAATTTGCTTGGTTGAGAGATGATGAATTTGCACGTCAAGCCATAGCTGGAGTTAACCCTGTTACCATTGAGAGACTTACAGTTTTCCCACCAGTTAGTAAATTAGATCCTGAAATCTATGGTCCACAAGAGTCTGCTCTTAAAGAAGAACACATTTTAAATCAACTTAATGGCATGACCGTCCAAGAGGCAATAGATCAAAATAAGTTGTTTATAATTGATTATCATGATATCTATCTTCCATTTTTGGAAAGGATCAATGCTTTGGATGGTAGAAAATCATATGCCACACGTACCATATATTTCTTGACACCACTTGGTACTCTAAAGCCTGTTGCAATTGAACTTAGCCTGCCTCCATCTGGACCAAATACTCGATCAAAACGTGTAGTTACACCTGCTTTAGATGCAACTACTAATTGGATGTGGATGCTTGCAAAAGCTCATGTTTGCTCTAATGATGCTGGTGTGCACCAACTTGCCCACCATTGGCTACGTACACATGCTTGCATGGAACCATTTATATTGTCTGCTCATAGGCAATTAAGTGCAATGCATCCAATTTTCAAGTTATTGGATCCACACATGAGGTATACTTTGGAGATCAATGCTTTAGCTCGCCAGAGCTTGATCAATGCAGATGGTGTCATTGAATCTTGCTTCACTCCTGGTCGCTATGCAATGGAGATTAGTTCTGCTGCTTACAAAGCCAATTGGCGTTTTGACAAAGATAGCCTCCCTCAAGATCTCATCCGCAGAGGAATGGCAGTACCTGACCCAACACAACCACATGGCCTAAAGATAATAATGAAAGATTACCCTTATGCAGAAGATGGTCTTCTAATTTGGTCAGCAATAGAAAATTGGGTCCGCACCTATGTGAACTATTACTACCCAAATCCAAGCCTAATAATCAATGATAGAGAGTTACAAGCTTGGTACTCTGAATCAATCAATGTAGGCCACGCCGATTTAAAAGATGAATCATGGTGGCCGAAATTGAACGATAGTGACAATCTTGTCTCAGTCCTAACAATCTTAATTTGGAATGCATCCGCGCAACATGCCGCGCTTAATTTCGGACAATATCCTTATGGAGGGTACGTGCCGAATCGTCCACCCTTGATGAGAAGATTAATTCCAGAAGAAAATGATCCTGAATATGCGAGTTTCATATCTGATCCACAAAAGTATTTTCTCAATGCATTGCCTAGTTTGTTGCAAGCTACAAAATATATGGCTGTTGTTGACACGCTTTCGACTCATTCGTCTGACGAAGAGTATTTAGGCGAGAGGCAACAACCTTCGATTTGGACGGGTGATGCTGAGATTGTCGAAGCGTTTTATGAATTCTCTGCTGAAATTGGAAAGATTGATAAGTTGATTGATAGTAGGAATGGTGATAGGAATTTGAGGAACCGTTGTGGTGCTGGTGTTTTGCCTTATGAATTACTTGCTCCTAGTTCTGGACCTGGTGTTACATGCAGAGGGGTTCCAAATAGTGTGTCCACCTAA 2787 0.3893 MALTNEIMGSSLIERSLFPSSSPCFQQKNGRFLINPVLVPFGNKRVVRLRKSAKFPVAAISEDLVKGSSSSSVSSSSSSSSVPAEKPVKFKVRAVVTVRNKIKEDFKETFVKHLDALTDRIGRNVVLELFSTEIDPKTKAAKKTNEAVLKDWSKKTNIKAERVNYTAEFTVDSNFGEPGAITVINNHQKEFYLENITIEGFATGAFHFPCNSWVQARKDLPGKRIFFSNKAYLPDDTPAGIKLLREKDLKNLRGDGKGVRKLSDRIYDYDTYNDLGNPDRGIDLARPTLGGSEMYPYPRRCRTGREPSDTDITCESRVEKPLPMYIPRDERFEESKMNTFSVKRLKGVLHNLLPGLKSSLSAQNKDFNEFTDVDGLYSVGLLIKLGLQDDILKKLPLPHIVSKIQESTSQGILKYDIPKIISKDKFAWLRDDEFARQAIAGVNPVTIERLTVFPPVSKLDPEIYGPQESALKEEHILNQLNGMTVQEAIDQNKLFIIDYHDIYLPFLERINALDGRKSYATRTIYFLTPLGTLKPVAIELSLPPSGPNTRSKRVVTPALDATTNWMWMLAKAHVCSNDAGVHQLAHHWLRTHACMEPFILSAHRQLSAMHPIFKLLDPHMRYTLEINALARQSLINADGVIESCFTPGRYAMEISSAAYKANWRFDKDSLPQDLIRRGMAVPDPTQPHGLKIIMKDYPYAEDGLLIWSAIENWVRTYVNYYYPNPSLIINDRELQAWYSESINVGHADLKDESWWPKLNDSDNLVSVLTILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEENDPEYASFISDPQKYFLNALPSLLQATKYMAVVDTLSTHSSDEEYLGERQQPSIWTGDAEIVEAFYEFSAEIGKIDKLIDSRNGDRNLRNRCGAGVLPYELLAPSSGPGVTCRGVPNSVST* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0758 928 SUPERFAMILY Lipoxigenase 234 927 IPR036226 -
Mal5g0758 928 CDD PLAT_LH2 90 229 IPR042057 -
Mal5g0758 928 Gene3D - 233 335 - -
Mal5g0758 928 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 231 928 IPR013819 GO:0016702|GO:0046872
Mal5g0758 928 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 90 232 IPR036392 GO:0005515
Mal5g0758 928 Gene3D PLAT/LH2 domain 78 232 - -
Mal5g0758 928 PRINTS Plant lipoxygenase signature 224 245 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 198 216 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 263 279 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 452 471 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 840 854 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 413 429 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 519 543 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 364 385 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Plant lipoxygenase signature 296 315 IPR001246 GO:0016491
Mal5g0758 928 PRINTS Lipoxygenase signature 564 581 IPR013819 GO:0016702|GO:0046872
Mal5g0758 928 PRINTS Lipoxygenase signature 602 622 IPR013819 GO:0016702|GO:0046872
Mal5g0758 928 PRINTS Lipoxygenase signature 582 599 IPR013819 GO:0016702|GO:0046872
Mal5g0758 928 ProSitePatterns Lipoxygenases iron-binding region signature 1. 582 596 IPR020833 GO:0016702|GO:0046872
Mal5g0758 928 Gene3D - 336 425 IPR027433 -
Mal5g0758 928 Gene3D - 561 927 - -
Mal5g0758 928 ProSiteProfiles PLAT domain profile. 106 228 IPR001024 GO:0005515
Mal5g0758 928 ProSitePatterns Lipoxygenases iron-binding region signature 2. 609 619 IPR020834 GO:0016702|GO:0046872
Mal5g0758 928 Gene3D - 426 559 - -
Mal5g0758 928 Pfam Lipoxygenase 241 911 IPR013819 GO:0016702|GO:0046872
Mal5g0758 928 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 40 927 - -
Mal5g0758 928 Pfam PLAT/LH2 domain 143 227 IPR001024 GO:0005515
Mal5g0758 928 PANTHER LIPOXYGENASE 40 927 IPR000907 GO:0016702|GO:0046872
Mal5g0758 928 SMART LH2_4 90 229 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0758 Mal-Chr5 12543546 12550652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0758 1 927 Acyl Lipid Metabolism Gene Families AT1G17420 70.430 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0758 K00454 - gmx:100793614 1571.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0758 5 12543546 12550652 Mal5g0758 5 12543546 12550652 ECH