Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0753 ATGGCGGTTTCAACTATAGCGTTATACGCGAGTCCACCGAGTAGTGTGTGTTCCACACCGCATCAGATTAATCCTCACGCTTCGTATGATTTCGAATTAGGATCTAGATCTTCGTCTCCGGCATCGACGGCGACGGCGGCGTCGACGTCGGGGAAATCGGTGATGGGTGGTTTATCGTGTTTGTTTTCATCTCCGACGGTGGTGAAACATGTTCCGTTAACTTCGAGTTTTTCCGGTGGTGGTGATGAAGATGAATTGAAGGAGTTGAGTAGTTCGTTTTCGTATTCATTTTCACCGACGAAGTTTGGTGGATCTTGGAAGAGAGATCATAGTCCAGTTTCGGTTTTTCAGTGTCCTGTTTCGTGTAGTAATAGCATCGGTGCTGGTGCTGGTCCCGGAACGGTTCGATCGGGGAGGAGTAGTGGTGGTAATGGGTTTTTTGATGGGTTTGTGAGGAGTGCTTTGGGTTCTTGTTTGGATTATGATTCTACTGGTGTTAGATTACGCGGTGGTGGTGGTGAATTTGATGGTGTTGGTGGTGGCTCTGGAATTGTTGATGAGTTGACTTTTAATTTGGAAGATACTCTTGTGGAGGGTTGTTCTGGAATTGAGTTTGAGCCTTATGCTAAGAAGTTGTTGATGAGTGCTCAGTTAAGACATAAGATCTTTTGTGAAGAGTTTGTTATTAAGGCCTTTTGTGAAGCTGAGAAAGCTCATAGAGGACAGATGCGAGCTAGTGGGGATCCGTATTTGCAGCATTGTTTGGAAACTGCTGTGTTATTGGCTTTGATCGGTGCGAATTCAACTGTAGTTGCTGCAGGGCTTTTGCATGATACACTTGATGATGCATTTCTTACTTATGATTATATATTTGGGATGTTTGGAGCTGGAGTTGCTGATTTAGTTGGAGGGGTTTCTAAACTGAGTCACTTAAGCAAGCTGGCTCGAGACAACAATACAGCTAGCAAGTCTGTTGAAGCTGACCGCCTGCATACAATGTTCCTTGCCATGGCAGATGCAAGAGCTGTTCTCATTAAATTGGCCGACCGATTACATAATATGATGACACTAGATGCATTGCCGGTTGCCAAGCAGCAGAGGTTTGCAAAGGAAACTTTGGAGATTTTTGCACCTTTGGCCAACCGCTTAGGAATATCTAATTGGAAGGAACAATTAGAAAATTTATGTTTTAAGCATCTCAACCCTGTACAGTATAAAGAGCTTTCATCAAAGCTTGTGGAATCGTATGATGACGCAATGATTGCTTCTGCAATAGAGAGATTAGAGCAAGCACTCAAAGATGAAGGCATTTCATATCATGTCATTTCTGGGCGGCACAAGAGCTTGTATAGCGTTTATTGCAAAATATTAAAGAAAAAACTAACCATAGATGATATCCATGACATTTATGGTCTGCGCTTGATTGTTGAGAAGGAGGAAGACTGTTACAAAGCCTTAAAAGTTGTTCACCAGTTATGGTCTGAGGTGCCAGGAAAACTGAAAGATTACATACATAGCCCTAAGTTCAATGGGTATCAATCTCTTCACACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTCGAAGTACAAGTTCGAACAAAAGATATGCATTTGCAGGCAGAATTTGGATTCGCTGCTCATTGGAGGTACAAGGAAGATCATTGTCAGCTTTCTTCATATGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAAAGATTCCACTTCTGTTGGATATGTCGATTCAATCAAGCCACCTTGCAAGTTCCCTTCTCATGCTGATAATTGTCCATATTCTTACAAGCCTGATTGCGGACAGGATGGACCTGTGTTTGTTATCATGATTGAGAATGACAAGATGTCTGTCCAAGAATTTTGTGCAAACTCAACAGTACTGGATTTGTTGGAAAGGGTCGGGCGAGCAAGCTGTAGGTTGACAACATATAGGTTCCCTCTGAAGGAAGAATTGAGGCCAAGGCTGAATCATAAGCCTGTAAGTGATCCAAATTGCAAGTTGAAGATGGGAGATGTGATCGAGCTTACACCAACCATACCTGACAAGTATCTGACCGAATATAGGGAAGAAATTCAGCGAATGTATGATCGCGGGCTAACTGTATCAAGCATGGGAACTACTGCTACTGCAAGCAGCATGGTTGGCACTAGTTGA 2196 0.4349 MAVSTIALYASPPSSVCSTPHQINPHASYDFELGSRSSSPASTATAASTSGKSVMGGLSCLFSSPTVVKHVPLTSSFSGGGDEDELKELSSSFSYSFSPTKFGGSWKRDHSPVSVFQCPVSCSNSIGAGAGPGTVRSGRSSGGNGFFDGFVRSALGSCLDYDSTGVRLRGGGGEFDGVGGGSGIVDELTFNLEDTLVEGCSGIEFEPYAKKLLMSAQLRHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDAFLTYDYIFGMFGAGVADLVGGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGISNWKEQLENLCFKHLNPVQYKELSSKLVESYDDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIVEKEEDCYKALKVVHQLWSEVPGKLKDYIHSPKFNGYQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPCKFPSHADNCPYSYKPDCGQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTTYRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPTIPDKYLTEYREEIQRMYDRGLTVSSMGTTATASSMVGTS* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0753 731 CDD HDc 248 376 IPR003607 -
Mal5g0753 731 Gene3D Hypothetical protein af1432 209 401 - -
Mal5g0753 731 PANTHER - 1 725 - -
Mal5g0753 731 CDD NT_Rel-Spo_like 424 542 IPR007685 GO:0015969
Mal5g0753 731 Pfam Region found in RelA / SpoT proteins 444 553 IPR007685 GO:0015969
Mal5g0753 731 Gene3D Beta Polymerase, domain 2 403 534 IPR043519 -
Mal5g0753 731 SMART RelA_SpoT_2 444 554 IPR007685 GO:0015969
Mal5g0753 731 Pfam HD domain 235 385 - -
Mal5g0753 731 ProSiteProfiles S4 RNA-binding domain profile. 668 705 - -
Mal5g0753 731 SUPERFAMILY HD-domain/PDEase-like 210 401 - -
Mal5g0753 731 ProSiteProfiles HD domain profile. 250 354 IPR006674 -
Mal5g0753 731 SMART hd_13 246 363 IPR003607 -
Mal5g0753 731 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 725 - -
Mal5g0753 731 SUPERFAMILY Nucleotidyltransferase 391 580 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0753 Mal-Chr5 12417298 12421045 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0753 245 551 EF-hand Containing Proteins AT3G17470 30.909 3.31e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0753 K00951 - gmx:100787301 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0753 5 12417298 12421045 Mal5g0753 5 12417298 12421045 ECH