Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0733 ATGAAGATGATTCATATGATTCTTTTCTTTTTAGCTCTTATCTCATATACCTCTAATGCTATTGATTCTGATGATTTCTGTGTAGCAAACTTATTGCTTTCAGACACCCCTTCAGGCTATCCATGCAAACCAGAAAAATTTGTAACAGCGAATGATTTCGCGTATACTGGCTTAGCAGCCGGAAGCACAGCAAACGCTTTTAAAGTTGGATTAACATCTGTAAATGTCAGTAATTTACCAGGTCTTAATGGACTTCATCTCTCTGCAGCAAGAATAGATATTGGTATAAATGGAAGTGTACCAATGCACACTCATCCTGATGCATCTGAATTAATAATCGTTATTCAAGGTCAATTTACTGTTGGAATTATCACACCTACAAAACTTATGGTGAAAACCCTTAATCCTAATGATGTTTTTGTTTTTCCAAAAGGACTATTGCATTTTCAAGTTAACACTGGTGCTGGAAATGCTATTGCTTTTGTTGCTTTTAGTAGCTCAAACCCTAGCATACATGTAACTAGTGTTTTGTTATTTGGTAACAACTTACCAACTCTCACAGTTCAAAAGACTACTCTTCTTGATCCTTCACAAATTATGAAGCTTAAGGCTGTGTTTGGTGGCAGTGGCTAG 633 0.3618 MKMIHMILFFLALISYTSNAIDSDDFCVANLLLSDTPSGYPCKPEKFVTANDFAYTGLAAGSTANAFKVGLTSVNVSNLPGLNGLHLSAARIDIGINGSVPMHTHPDASELIIVIQGQFTVGIITPTKLMVKTLNPNDVFVFPKGLLHFQVNTGAGNAIAFVAFSSSNPSIHVTSVLLFGNNLPTLTVQKTTLLDPSQIMKLKAVFGGSG* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0733 210 ProSitePatterns Germin family signature. 98 111 IPR019780 GO:0030145
Mal5g0733 210 Pfam Cupin 71 198 IPR006045 -
Mal5g0733 210 PANTHER GERMIN-LIKE PROTEIN 8-13 11 207 - -
Mal5g0733 210 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 11 207 - -
Mal5g0733 210 CDD cupin_OxOx 24 206 - -
Mal5g0733 210 PRINTS Germin signature 165 180 IPR001929 GO:0030145
Mal5g0733 210 PRINTS Germin signature 132 152 IPR001929 GO:0030145
Mal5g0733 210 PRINTS Germin signature 103 123 IPR001929 GO:0030145
Mal5g0733 210 SMART Cupin_1_3 56 200 IPR006045 -
Mal5g0733 210 SUPERFAMILY RmlC-like cupins 25 203 IPR011051 -
Mal5g0733 210 Gene3D Jelly Rolls 21 210 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0733 Mal-Chr5 12248649 12249281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0733 1 209 Miscellaneous Gene Families AT5G20630 48.341 6.57e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0733 - - mtr:MTR_8g020750 330.872