Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0728 ATGAAGTTTACTCCTATACTTTTCCTTTTCACTTTTCTCTCCACCACTTCCTATGCTTCAGTCCATGATTTTTGTGTAGGAGATATAAAAGCTCCAGAAACACCTACAGGCTATCACTGCATGCCACTTGCAAACATCACATCAGACGATTTCGTCTTTCACGGCTTCGTAGCTGGAAATACTAACAACTCTTTCAATGCTGCACTTACCTCCGCGTTCGTCACCGATTTTCCAGGTCTTAACGGACTTGGAATCTCCGCGGCGCGGTTAGACATAGCGGAAGGCGGATCTATTCCAATGCATACTCATCCAGGTGCTACTGAATTATTGATTATGGTTCAAGGTGAAATAACTGCTGGATTTCTAACACCTACCGCAGTTTATTCTAAATCGTTGAAACCGGGTGATCTTATGGTTTTTCCACAAGGGATGTTACATTTTCAAGTTAATTCTGGTAAGGGAAAAGCTACTGCTTTTCTTACTTTTAGTAGTGCAAATCCTGGTGCTCAATTACTTGATCTTCTTTTGTTTTCCAATAATTTACCTTCTGAATTAGTGGCACAAACTACTTTTCTTGATCTTGCTCAAGTGAAGAAGCTAAAGGCTCGGTTTGGTGGAAGAGGTTAG 627 0.4099 MKFTPILFLFTFLSTTSYASVHDFCVGDIKAPETPTGYHCMPLANITSDDFVFHGFVAGNTNNSFNAALTSAFVTDFPGLNGLGISAARLDIAEGGSIPMHTHPGATELLIMVQGEITAGFLTPTAVYSKSLKPGDLMVFPQGMLHFQVNSGKGKATAFLTFSSANPGAQLLDLLLFSNNLPSELVAQTTFLDLAQVKKLKARFGGRG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0728 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 204 - -
Mal5g0728 208 Gene3D Jelly Rolls 18 207 IPR014710 -
Mal5g0728 208 ProSitePatterns Germin family signature. 96 109 IPR019780 GO:0030145
Mal5g0728 208 CDD cupin_OxOx 19 204 - -
Mal5g0728 208 SUPERFAMILY RmlC-like cupins 50 205 IPR011051 -
Mal5g0728 208 Pfam Cupin 57 197 IPR006045 -
Mal5g0728 208 PANTHER GERMIN-LIKE PROTEIN 7 204 - -
Mal5g0728 208 SMART Cupin_1_3 54 198 IPR006045 -
Mal5g0728 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Mal5g0728 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Mal5g0728 208 PRINTS Germin signature 101 121 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0728 Mal-Chr5 12189454 12190080 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0728 19 208 Miscellaneous Gene Families AT1G72610 59.375 8.65e-78 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0728 - - gmx:100783206 336.65