Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0727 ATGAAGATTATACACTTATTTTTTCTTTTCACCCTTCTCTTATTCACTACTTCCCATGCTTCTGTCAATGATTTTTGTGTAGCAATTTTACAGGCTCCAGATACCCCTTCAGGCTATCATTGCAAACCCCTTGCAAATATCACATCAGACGATTTCGTCTTTCACGGTTTCGTAGCCGGAAATACCAACAACTCTTTCAATGCAGCACTTACCTCTGCATTTGTCACTGATTTTCCAGGTCTTAACGGACTTGGAATCTCCGCAGCACGGTTAGATATAGCTGAAGGTGGATCAATTCCAATGCATACTCATCCCGGTGCTACCGAATTATTGATAATAGTTCAAGGTGAAATAACCGCTGGATTTCTGACACCTACTGCAGTTTATTCTAAGACGTTAAAACCAGGTGATCTTATGGTTTTTCCACAAGGGATGTTACATTTTCAAATTAATTCTGGTAAGGGAAAAGCTACTGCTTTTCTTACTTTTAGTAGTGCTAACCCTGGTGCTCAATTACTTGATCTTCTTTTGTTTTCCAATAATTTGCCTTCTGAATTAATTGCACAAACTACTTTTCTTGATCTTGCACAAGTGAAGAAGCTAAAGGCACGTTTTGGTGGAAGAGGGTAG 630 0.3905 MKIIHLFFLFTLLLFTTSHASVNDFCVAILQAPDTPSGYHCKPLANITSDDFVFHGFVAGNTNNSFNAALTSAFVTDFPGLNGLGISAARLDIAEGGSIPMHTHPGATELLIIVQGEITAGFLTPTAVYSKTLKPGDLMVFPQGMLHFQINSGKGKATAFLTFSSANPGAQLLDLLLFSNNLPSELIAQTTFLDLAQVKKLKARFGGRG* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0727 209 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Mal5g0727 209 Gene3D Jelly Rolls 19 208 IPR014710 -
Mal5g0727 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Mal5g0727 209 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Mal5g0727 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
Mal5g0727 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 6 205 - -
Mal5g0727 209 SMART Cupin_1_3 55 199 IPR006045 -
Mal5g0727 209 CDD cupin_OxOx 18 205 - -
Mal5g0727 209 SUPERFAMILY RmlC-like cupins 51 206 IPR011051 -
Mal5g0727 209 Pfam Cupin 58 198 IPR006045 -
Mal5g0727 209 PANTHER GERMIN-LIKE PROTEIN 6 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0727 Mal-Chr5 12183252 12183881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0727 19 209 Miscellaneous Gene Families AT1G72610 59.585 2.30e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0727 - - gmx:100783206 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0727 5 12183252 12183881 Mal5g0727 5 12183252 12183881 ECH