Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0724 ATGATTTTCATTCTTTTCCTCTTAACTCTTCTCTCACATTCCACAACCAATGCTTCTGTAGTAGATTTCTGTGTAGCAGATTTATCTTATCCAACAACCCCTTCAGGCTACCCTTGCAAAAAATCAGTAACAATCAATGACTTTGTTTTGTCCAACTTCAATTCAGGAAACACTTCATCAAATTTTTTCAAATTTTCAGTAACTCCTGCATTTGTTAATCAATTTCCAGCTGTTAATGGCCTTGGTTTATCAGCAGCAAGATTAGACTTAGACATTGGAGGTGTAATACCAATGCATTCACATCCCGGCGCATCGGAGTTAATGATTGTGGTACAAGGTCGTATAACTGCTGGATTTATTTCTTCTGATAATTCTGTTTTTATTAAGACACTTTCTAAAGGTCAAATTTTGGCTCTTCCACAAGGATTGTTGCATTTTCAATTTAATGCTGGAAGCAATAAAGCTAGTGCTTATCTTACATTTAGTAGCTCAAACCCTGGTACACAAATTGTTGATCTTGCTTTGTTTGGAAATAATTTGAGTTCTGCTAATGTGATAAAGAGTACTTTGCTTGATCCTGCTCAAGTTAGAAAGCTTAAGGCTATTTTTGGTGGGAGTGGCTAG 624 0.3606 MIFILFLLTLLSHSTTNASVVDFCVADLSYPTTPSGYPCKKSVTINDFVLSNFNSGNTSSNFFKFSVTPAFVNQFPAVNGLGLSAARLDLDIGGVIPMHSHPGASELMIVVQGRITAGFISSDNSVFIKTLSKGQILALPQGLLHFQFNAGSNKASAYLTFSSSNPGTQIVDLALFGNNLSSANVIKSTLLDPAQVRKLKAIFGGSG* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0724 207 CDD cupin_OxOx 18 203 - -
Mal5g0724 207 Gene3D Jelly Rolls 17 207 IPR014710 -
Mal5g0724 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 5 203 - -
Mal5g0724 207 Pfam Cupin 63 192 IPR006045 -
Mal5g0724 207 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 5 203 - -
Mal5g0724 207 PRINTS Germin signature 129 149 IPR001929 GO:0030145
Mal5g0724 207 PRINTS Germin signature 99 119 IPR001929 GO:0030145
Mal5g0724 207 PRINTS Germin signature 162 177 IPR001929 GO:0030145
Mal5g0724 207 SUPERFAMILY RmlC-like cupins 20 200 IPR011051 -
Mal5g0724 207 ProSitePatterns Germin family signature. 94 107 IPR019780 GO:0030145
Mal5g0724 207 SMART Cupin_1_3 51 197 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0724 Mal-Chr5 12081737 12082360 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0724 17 207 Miscellaneous Gene Families AT1G72610 54.922 2.03e-74 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0724 - - lja:Lj3g3v2590370.1 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0724 5 12081737 12082360 Mal5g0724 5 12081737 12082360 ECH