Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0718 ATGGCGGAAAACGTAATCGGTTCACCACCTTCCACAATGGACCCTCAAATTCAAAACCCCTCTTCTTCAAACCCTACAATCTCATCTCCTTCACAAATTCCCCAACAGCAACAACAATCTCCTTCAATTCACATCTCAAATTCATCACCTTCTCTCTCTCAAGATCAACAACAACAACAACATTCACAGTTACATACTATTAATACCATTAACCCTAACCCTAATGTTTCCAATTTTCAACTTCAACAAACGCTGCAACGTTCTCCTTCTATGTCCCGCCTTAATCAAATTCAACCTCAGCAGCAGCAAGTTGCGAGGCAGCAAGCTGGACTTTATGGTGGGCAGATGAATTTTGGAGGATCAGCTGCTGTTTCAGCTCAGCAACAGCAATTAAGCGGCGGTGTTGGTATCAGCGGTAATGCTTCAAATTTGTCGCGATCGGCGTTGATTGGACAGAGTGGTCATTTTCCTATGTTGTCTGGTGCTGGAGCAGCTCAGTTTAACCTATTAACTTCGCCGAGGCAGAAAGGTGGTATGGTGCAATCCTCACAATTTTCTTCAGCGAATTCTGCTGGACAGTCACTGCAAGGAATGCAACAAGCTATTGGGATGATGGGGTCGCCCAATCTAGCCTCTCAAATGAGGACTAATGGAGGTCTTTACGCTCAGCAGCAGCAGATTCGATTGACCCCGGCCCAAATTAGGCAACAGCTCTCACAGCAGGCTTCACTTAACAATCAACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAATTCTCAGTTGTCTGGGTTGTCTCAGAATGGGCAGCCTGCCGTGATGCATAACTCTTTAACACAGAATCAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCTCCCCGTTGCGTCTTCAACAACATCAGAGGCAGCAGCAGCAGCTGGCTTCATCTGCTCAACTGCAACAAAACTCTATGACCCTGAACCAACAGCAATTGTCCCAGTTTATGCAGCAGCAAAAATCCATGGGGCAACCTCAGCTTCATCAGCAACAGCCATCCCCTCAGCAGCAGCAGCACCAACAACAACTTCTACAGCAGCAGCAACAGCAACAATCTCAATTACCAGCATCTGTTCATCAACAACAACAGCTGCAGTCTCCGAGGATGGCAGGACCTACAGGTCAAAAGTCAATAAGTTTAACAGGGTCGCAGCCAGATGCTACTGCATCTGGCGCGACCACACCTGGCGGAAGTTCAAGTCAAGGAACCGAAGCAGCTACAAACCAAGTACTTGGAAAAAGAAAGATACAGGATTTAGTTGCACAGGTGGATCCACAGGGTAAGCTGGACCCTGAAGTTATAGATCTTCTTTTAGAGCTTGCCGATGACTTCATTGATTCTGCAACTACACATGGTTGTATTTTGGCAAAACATAGAAAATCATCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTGACAATTCCTGGATATTCAAGTGAAGAGAAGAAGTACCAGAGTAGACCTCTCTCCAATGACCTTCACAAGAGACGGCTAGATGCGGTTCGCACATTGATGGAATCTTCTTCACTCCCCAAATCAAATATTAGCAATTCTAAAGATATCAATACACAGGGCCATCCCAACCCTGCAGTTTCCCATCATCTAATGAGACCCCTGAGTTCAGACCAGTTGGTTTCTCATTCAAGTAGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 1758 0.4539 MAENVIGSPPSTMDPQIQNPSSSNPTISSPSQIPQQQQQSPSIHISNSSPSLSQDQQQQQHSQLHTINTINPNPNVSNFQLQQTLQRSPSMSRLNQIQPQQQQVARQQAGLYGGQMNFGGSAAVSAQQQQLSGGVGISGNASNLSRSALIGQSGHFPMLSGAGAAQFNLLTSPRQKGGMVQSSQFSSANSAGQSLQGMQQAIGMMGSPNLASQMRTNGGLYAQQQQIRLTPAQIRQQLSQQASLNNQQVQGLPRSSSLAFMNSQLSGLSQNGQPAVMHNSLTQNQWLKQMPAMSGPASPLRLQQHQRQQQQLASSAQLQQNSMTLNQQQLSQFMQQQKSMGQPQLHQQQPSPQQQQHQQQLLQQQQQQQSQLPASVHQQQQLQSPRMAGPTGQKSISLTGSQPDATASGATTPGGSSSQGTEAATNQVLGKRKIQDLVAQVDPQGKLDPEVIDLLLELADDFIDSATTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKYQSRPLSNDLHKRRLDAVRTLMESSSLPKSNISNSKDINTQGHPNPAVSHHLMRPLSSDQLVSHSSSSQMLQQMTRF* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0718 585 CDD TAF12 429 497 IPR003228 GO:0005669|GO:0006352
Mal5g0718 585 Pfam Transcription initiation factor TFIID subunit A 430 497 IPR003228 GO:0005669|GO:0006352
Mal5g0718 585 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 11 584 - -
Mal5g0718 585 MobiDBLite consensus disorder prediction 9 77 - -
Mal5g0718 585 MobiDBLite consensus disorder prediction 530 559 - -
Mal5g0718 585 MobiDBLite consensus disorder prediction 1 77 - -
Mal5g0718 585 MobiDBLite consensus disorder prediction 291 319 - -
Mal5g0718 585 SUPERFAMILY Histone-fold 427 498 IPR009072 GO:0046982
Mal5g0718 585 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 11 584 IPR037794 GO:0000124|GO:0005669|GO:0046695
Mal5g0718 585 MobiDBLite consensus disorder prediction 531 554 - -
Mal5g0718 585 MobiDBLite consensus disorder prediction 299 319 - -
Mal5g0718 585 Gene3D Histone, subunit A 424 499 IPR009072 GO:0046982
Mal5g0718 585 MobiDBLite consensus disorder prediction 332 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0718 Mal-Chr5 11965157 11973647 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0718 K03126 - gmx:100783017 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0718 5 11965157 11973647 Mal5g0718 5 11965157 11973647 ECH