Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0711 ATGGGAAAATTAAATTTCAAAAAAGACAAAATGGGTATCATTGAAAAGATCAAAGAAATTGAAGCCGAGATGGCTCGGACTCAGAAAAACAAAGCCACTGAGTATCATCTTGGGCAGCTCAAGGCTAAGATTGCAAAACTAAGGACACAATTGTTGGAGCCTCCAAAGGGTTCTAGTGGCGGTGGAGACGGATTTGAAGTTACAAAATTTGGCCATGGACGTGTTTCACTTATCGGATTTCCAAGTGTGGGAAAGTCCACTCTTTTGACATTATTAACGGGCACTCATTCAGAAGCTGCATCTTATGAGTTCACAACTTTGACCTGCATTCCTGGAATTATACACTACAATGATACTAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTTATTGCTGTTGCTAAATCTTCAGACATAGTATTGATGGTTCTTGATGCCTCCAAAAGTGAGGGTCATAGGCAAATATTGACTAAGGAGCTGGAAGCTGTCGGCTTGCGGTTAAACAAGAGACCACCTCAGATATATTTTAAAAAGAAAAAGACGGGGGGCATTTCATTCAACAGCACAATGCCTTTAACTCATGTGGATGAGAAGCTTTGTTATCAGATTCTACACGAGTACAAAATTCACAATGCAGAGATCCTTTTCCGTGAGGATGCGACGGTTGACGATTTCATAGATGTCATTGAAGGAAACCGTAAATACATGAAGTGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTATCCCGTCAACCTAATTCTGTTGTCATTAGCTGCAATTTGAAGCTGAATTTAGACAGACTACTTGCAAGGATGTGGGATGAAATGGGTCTAGTTAGAGTTTATACAAAACCACAAGGCCAGCAGCCTGATTTCGGTGATCCAGTGGTTCTTTCAGCTGATAGAGGTGGCTGCAGTGTAGAAGACTTCTGCAACCACATACATAGAAGTTTGGTGAAGGATGTGAAGTATGTTCTGGTCTGGGGTACAAGTGCTAGGCACTATCCACAACATTGTGGCCTTAGTCATGTTCTTTGTGATGAGGATGTTGTTCAGATTGTTAAGAAAAAGGAAACGGACGAGGGAGGTAGAGGTCGATTCAAGTCGCATTCCGACGCTCCTGCTCGGATATGTGACAGACAGAAGAAAGCCCCACTTAAACAATAA 1230 0.4179 MGKLNFKKDKMGIIEKIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGDGFEVTKFGHGRVSLIGFPSVGKSTLLTLLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILTKELEAVGLRLNKRPPQIYFKKKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDFIDVIEGNRKYMKCVYVYNKIDVVGIDDVDRLSRQPNSVVISCNLKLNLDRLLARMWDEMGLVRVYTKPQGQQPDFGDPVVLSADRGGCSVEDFCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLSHVLCDEDVVQIVKKKETDEGGRGRFKSHSDAPARICDRQKKAPLKQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0711 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 312 IPR027417 -
Mal5g0711 409 Pfam TGS domain 300 376 IPR004095 -
Mal5g0711 409 CDD TGS_DRG1 297 377 - -
Mal5g0711 409 PANTHER DEVELOPMENTALLY-REGULATED G-PROTEIN 1 11 409 - -
Mal5g0711 409 SUPERFAMILY TGS-like 294 376 IPR012676 -
Mal5g0711 409 Pfam C-terminal region of MMR_HSR1 domain 194 299 IPR031662 -
Mal5g0711 409 Gene3D - 5 101 - -
Mal5g0711 409 Gene3D - 142 247 - -
Mal5g0711 409 PRINTS GTP1/OBG GTP-binding protein family signature 140 158 IPR006073 GO:0005525
Mal5g0711 409 PRINTS GTP1/OBG GTP-binding protein family signature 96 114 IPR006073 GO:0005525
Mal5g0711 409 PRINTS GTP1/OBG GTP-binding protein family signature 123 138 IPR006073 GO:0005525
Mal5g0711 409 PRINTS GTP1/OBG GTP-binding protein family signature 75 95 IPR006073 GO:0005525
Mal5g0711 409 CDD DRG 74 305 IPR045001 GO:0003924|GO:0005525
Mal5g0711 409 Gene3D - 291 383 IPR012675 -
Mal5g0711 409 MobiDBLite consensus disorder prediction 382 409 - -
Mal5g0711 409 TIGRFAM small_GTP: small GTP-binding protein domain 74 223 IPR005225 GO:0005525
Mal5g0711 409 Coils Coil 10 30 - -
Mal5g0711 409 ProSitePatterns GTP1/OBG family signature. 125 138 IPR006074 GO:0005525
Mal5g0711 409 ProSiteProfiles TGS domain profile. 298 376 IPR004095 -
Mal5g0711 409 PANTHER - 11 409 IPR045001 GO:0003924|GO:0005525
Mal5g0711 409 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 73 298 IPR031167 GO:0005525
Mal5g0711 409 Pfam 50S ribosome-binding GTPase 74 190 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0711 Mal-Chr5 11869546 11877504 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0711 K06944 - gmx:100778178 762.681