Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0680 ATGAATTTGCAACAAGTTGGGCAGCCTAAACCATCTAATGGATATGGTCGTCGGAAATTTGAAAAAGACGGGGCATCTAAATCTGTTGTCCCTGGAAAATCAAATGCTGGCAGATTAGCGAGTACAGGTGCAGTGACAGGTAGTAAAGGTGGTAGTTATGAGAGTCCTTCACATGATCGACTAGTATTTTTAACATCATGCCTTATTGGGCACCAGGTGGATGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCTACAAATACTGAGAAAGATTTTGGAATCATTTTAAAAATGGCTTGCTTGACAAAGGATGGGTCTTCGCAAGGGCAGGGCTCTGGTGCTGAATTTGTCAGCAAAGCTCCTTCCAAGACTTTAATTATACCTGGCAAAGAACTTGTACAAGTCATAGCAAAGGATGTTTCTGTTTCTACTGGTGACGTAGCCAGTGAATCTCACTATGATGTGCAGCAGGAGATCATGGTTGATTCGGTAATATCTCAACCTCGTCATGTTGAGATAGGGAGAGAATTACACCGATGGGTACCTGATGAAGATGTTCCACAATGCCCTGAACTTGACAATATCTTTGATGGCCCTTGGAACAGTTCTAGGGGATGGGATCAGTTTGAAACAAATAAAATGTTGTTTGGGGTAAAAAGCACATTTGATGAGGAACTCTATACAACAAAGCTTGAAAAAGGGCCTCAGATGAGAGACTTGGAGATGCAAGCTCTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACTCAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTACCCTGATGACTTTGACATTGATGAAGAGACCAGGTTCTCTTCTGTATATAGGGGTAAAGGTGTTGACGATGAATATGATGAAAATGAAGACAATTTGTTGGATTCACAAAACTCTGAAACATTTGGTGATATTTCTGATCCAGTCATAAAGAGACCAGGAAAAGTAAGTGGTGGGAAAGGCAAAAATGGAGCTCAAACATGGTCAAATTTCTCCTTTATGTCATCTCAGTCAAAAACTGGTGGGGATTTATGCCGCTCTGGTTCTTATGATCACGCTAAGCAGTTATCGTCTGAACTACCTGGCCAAAGTTACTCATTTTCAGATGGGGAAAGCAGGATTCAGGATAACTCAGTTTCTGATCTACACGGAGCCGATGGTAACACCAAGGAAGAAAATCAGACGCAAGCTGAGGATGTACAGCTGTTGAAATTTGAGGATATACAGCCAGCAATCAGCTTGAAGAAAGATGGCTCTGATAAAGGGGGATTACCTCCTACTAATGCCCCCTCCTATGTCTCGTCTACTCATATTTCATCGAAGATTGACGAAAAAACTGGATCGCATGGAGAGTTGACTGGGGGTTCAGAATCTGGCAGAGCAAGTTGGGAAACAAAACCCTTAAATTCACGTGGAAGATTAGAAACTCGTATATCATCTGGTTCAGATCGTGTAGCAGGTGTGGCAACATATTCTGGTCCCAGTCTATCACCAAGTTCTTCACTTGGTTCACTGTCTTCTGAAAAATCAACTCTGAATCCCAATGCAAAGGAATTTAAGCTGAACCCAAATGCTAAGAGTTTCGTTCCGTCTCAAACATCTGTTAGGCCTCGCTCCCCAGTGTCTGATAATTCCTTCTATTTCCCAGCTAACGTATCTGCTGTGCCGAGTATGCCAACCATGCCAATGGGTGTGGGAGTTGGAACTTCTTTTGCCGGGCCACAACCTATCATGTATAATCCACAGGCAGCACAAATGCCATCCCAACCATATTTTCACCAGAATGGACCACAGTACGGACAACTTCATGGTCATCCTAGACAACAAGTTCTATACATGCCCAGTTACCTACCTGAGACGCCATATAAGGGACGGAACTATTAA 1917 0.4262 MNLQQVGQPKPSNGYGRRKFEKDGASKSVVPGKSNAGRLASTGAVTGSKGGSYESPSHDRLVFLTSCLIGHQVDVQVKNGSIYSGIFHATNTEKDFGIILKMACLTKDGSSQGQGSGAEFVSKAPSKTLIIPGKELVQVIAKDVSVSTGDVASESHYDVQQEIMVDSVISQPRHVEIGRELHRWVPDEDVPQCPELDNIFDGPWNSSRGWDQFETNKMLFGVKSTFDEELYTTKLEKGPQMRDLEMQALRIAREIEGEETQDLHLAEERGLYPDDFDIDEETRFSSVYRGKGVDDEYDENEDNLLDSQNSETFGDISDPVIKRPGKVSGGKGKNGAQTWSNFSFMSSQSKTGGDLCRSGSYDHAKQLSSELPGQSYSFSDGESRIQDNSVSDLHGADGNTKEENQTQAEDVQLLKFEDIQPAISLKKDGSDKGGLPPTNAPSYVSSTHISSKIDEKTGSHGELTGGSESGRASWETKPLNSRGRLETRISSGSDRVAGVATYSGPSLSPSSSLGSLSSEKSTLNPNAKEFKLNPNAKSFVPSQTSVRPRSPVSDNSFYFPANVSAVPSMPTMPMGVGVGTSFAGPQPIMYNPQAAQMPSQPYFHQNGPQYGQLHGHPRQQVLYMPSYLPETPYKGRNY* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0680 638 SMART LsmAD_2 220 290 IPR009604 -
Mal5g0680 638 MobiDBLite consensus disorder prediction 425 551 - -
Mal5g0680 638 MobiDBLite consensus disorder prediction 462 476 - -
Mal5g0680 638 PANTHER ATAXIN 2-RELATED 4 629 IPR045117 GO:0003723
Mal5g0680 638 MobiDBLite consensus disorder prediction 366 407 - -
Mal5g0680 638 PANTHER ATAXIN-2 HOMOLOG 4 629 - -
Mal5g0680 638 Pfam Ataxin-2 C-terminal region 519 530 IPR009818 -
Mal5g0680 638 MobiDBLite consensus disorder prediction 39 53 - -
Mal5g0680 638 Coils Coil 241 261 - -
Mal5g0680 638 Pfam LsmAD domain 220 289 IPR009604 -
Mal5g0680 638 MobiDBLite consensus disorder prediction 1 54 - -
Mal5g0680 638 MobiDBLite consensus disorder prediction 308 334 - -
Mal5g0680 638 Pfam Ataxin 2 SM domain 58 142 IPR025852 -
Mal5g0680 638 MobiDBLite consensus disorder prediction 503 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0680 Mal-Chr5 11368843 11376623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0680 - - mtr:MTR_8g019560 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0680 5 11368843 11376623 Mal5g0680 5 11368843 11376623 ECH