Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0647 ATGGCTTCTCATTTACTCAATCACTCCAAAAAGTTAAGAAATGCTTCGAGTTTGTTACACCACGACCGTGCTCTTTTGCTTCGTATGTTTTGCACCGATGTTCAGCCCAGAAATCGAGATGCCCGGAAAACCCGATTACAAGACTGCGAGTCTTCAACAAGAAACCATGTCTCTGAATCAGCCCCAAACTTTACTCTTTCATTTGGCGTACAGAAGAGAAACATATCCACCATGAAAAGGGGTTACATGAGGGAGTCATTCTTGAATGGAGATATTTCACAAAATTCACAGGTTCTGTCAAGGAGAAGCTATTCATCAGCTTCAGATCTCCCACCACACCAGGAAATTGGAATGCCTTCTCTCTCGCCTACAATGACTGAGGGTAACATTGCAAGATGGTTGAAGAAAGAAGGTGATAAAGTTTCTCCTGGTGAAGTGCTCTGTGAAGTTGAAACTGATAAAGCTACAGTTGAAATGGAGTGCATGGAGGAAGGTTTTCTGGCCAAAATAGTACGTAAGGAAGGGGAAAAAGAAATTAAAGTTGGTGAGGTAATTGCCATAACTGTTGAAGAGGAGGAGGACATTGGCAAATTTAAAGACTACCAACCTTCAGCATCTGAATCTAGTGCTCCCCCTGCCAAAGAAACATCTGCCCCACCTCCCCCAAAGAAAGAGGTGGCAGAGGAGCCTGCCCGAGAACCTGAGCCAAAGGTTTCCAAACCTAGTGCACCACCTTCATCCGGAGATCGCATATTTGCTAGTCCCCTTGCTAGAAAGTTAGCTGAAGAGAAAAATGTGAATCTCTCCAGCATCAAAGGAACAGGACCTGATGGGCTCATTGTCAAGGGTGACATTGACGATTACTTGGCTTCTGGTGCTAAAGAAGTTTCAGCACCCTCAAAGGCCAAGGCTGCAACAGATGCAGCATTGGATTATACCGACATTCCTGTCTCTCAGATAAGGAAGATCACAGCTTCACGTTTGTTGCTATCAAAACAAACTATTCCTCATTACTATTTAACAGTAGATACATGTGTTGACAAACTCATGAGTTTGCGTAGCCAACTCAATTCATTGCAGGAAGCCTCTGGCGGTGCCCGCATATCAGTAAATGACCTTGTAATCAAGGCTGCTGCTTTGGCTCTCCGAAAAATTCCTCAGTGCAACAGTTCTTGGACAAATGACTATATTCGCCAGTATCATAATGTGAATATTAATGTTGCTGTGCAGACTGATCATGGACTCTTTGTTCCAGTCGTCAGGGATGCGGACAAGAAAGGCCTCTCCACAATAGGTGAAGAGGTCAAACAATTGGCAAAGAAAGCCAAAGAAAACAGCTTGAAACCCCAAGATTATGAGGGAGGTACATTTACAGTGTCTAATTTGGGAGGACCATTTGGTGTCAAACAGTTCTGTGCCATTGTCAATCCTCCTCAATCAGGCATTCTAGCAGTTGGATCTGCGGAGAGGAGGGTCGTTCCAGGTTCAGGGGATGAAGAATTCAAGTTTGCTTCCTTCATGGCCGTGACCCTCAGCTGTGATCATCGTGTAATAGATGGGGCGATTGGTGCCGAATGGTTGAAAGCATTCAAAGGCTACATTGAGAATCCAGAAACCATGTTGTTGTAA 1629 0.4438 MASHLLNHSKKLRNASSLLHHDRALLLRMFCTDVQPRNRDARKTRLQDCESSTRNHVSESAPNFTLSFGVQKRNISTMKRGYMRESFLNGDISQNSQVLSRRSYSSASDLPPHQEIGMPSLSPTMTEGNIARWLKKEGDKVSPGEVLCEVETDKATVEMECMEEGFLAKIVRKEGEKEIKVGEVIAITVEEEEDIGKFKDYQPSASESSAPPAKETSAPPPPKKEVAEEPAREPEPKVSKPSAPPSSGDRIFASPLARKLAEEKNVNLSSIKGTGPDGLIVKGDIDDYLASGAKEVSAPSKAKAATDAALDYTDIPVSQIRKITASRLLLSKQTIPHYYLTVDTCVDKLMSLRSQLNSLQEASGGARISVNDLVIKAAALALRKIPQCNSSWTNDYIRQYHNVNINVAVQTDHGLFVPVVRDADKKGLSTIGEEVKQLAKKAKENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIVNPPQSGILAVGSAERRVVPGSGDEEFKFASFMAVTLSCDHRVIDGAIGAEWLKAFKGYIENPETMLL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0647 542 MobiDBLite consensus disorder prediction 105 124 - -
Mal5g0647 542 Pfam Biotin-requiring enzyme 115 187 IPR000089 -
Mal5g0647 542 ProSiteProfiles Biotinyl/lipoyl domain profile. 113 189 IPR000089 -
Mal5g0647 542 TIGRFAM PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 115 542 IPR006257 GO:0004742|GO:0006090|GO:0045254
Mal5g0647 542 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 3 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL 52 542 - -
Mal5g0647 542 PANTHER DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX 52 542 - -
Mal5g0647 542 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 245 290 IPR036625 GO:0016746
Mal5g0647 542 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 138 167 IPR003016 -
Mal5g0647 542 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 311 542 IPR001078 GO:0016746
Mal5g0647 542 MobiDBLite consensus disorder prediction 221 236 - -
Mal5g0647 542 SUPERFAMILY Single hybrid motif 112 207 IPR011053 -
Mal5g0647 542 MobiDBLite consensus disorder prediction 38 59 - -
Mal5g0647 542 Gene3D - 108 214 - -
Mal5g0647 542 MobiDBLite consensus disorder prediction 200 251 - -
Mal5g0647 542 Gene3D - 240 293 IPR036625 GO:0016746
Mal5g0647 542 Pfam e3 binding domain 251 285 IPR004167 GO:0016746
Mal5g0647 542 CDD lipoyl_domain 114 187 - -
Mal5g0647 542 MobiDBLite consensus disorder prediction 38 52 - -
Mal5g0647 542 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 252 289 IPR004167 GO:0016746
Mal5g0647 542 Gene3D - 295 540 IPR023213 -
Mal5g0647 542 SUPERFAMILY CoA-dependent acyltransferases 311 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0647 Mal-Chr5 10514453 10523030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0647 2 542 Acyl Lipid Metabolism Gene Families AT1G54220 68.807 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0647 K00627 - gmx:100778218 828.55