Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0635 ATGAGAGGTGGAATCAATATTCTTGGTGGTGTAACTAAATGTATAATTGACACCGCTGCTTGCTCCATAGGCCGTTCTGTGGCTCTCAAGTTGATTAGTGCTACCACTTCTAATGGAAGTGGAAAAGGTAAAGTGGGAAAAAAAACGTATCTGGAAGGTCTTGTTACCTCCATACTAACTTTGGGAGCAGGACAATCGGCATTTGATATTCATTTTGAATGGGACAGTGACATGGGAGTTCCTGGAGCATTTTATATTGAAAATCACATGCTAGGAGAATTCTTCCTTGTAAGTTTGACCCTTGAAGATATTCCCAACCATGGAACCATCAACTTTGTTTGTAACTCTTGGATTTACAATCATAAAAAGTATAAAACTGAACGCATCTTCTTTGCCAACAAGACATACCTTCCAAGTGAAACACCACCTCCATTAGTTTACTACAGACAAGAAGAATTGAAGACATTAAGAGGAGACGGAACAGGAGAGCGTAAAGAGTGGGAAAGAATCTATGATTATGATGTCTACAATGACTTGGGTGATCCTGACAAGAGAGCTAGCTTGGCTCGTCCAGTAGTTGGAGGATCTAGCACCATGCCTTACCCACGAAGGGGGAGAACTGGTAGGAAACCAGCTAGGGAAGATCCAAAAAGTGAGAGTCGGAGTGACTTTGTTTACCTTCCAAGAGATGAATCATTTGGCCACTTGAAGTCATCAGACTTTCTTGTTTACTTGTTGAAATCAGCATCTCAAAATGTCATACCTCAATTACTATCTGCAGTTACATTACAATTCAATCAGCCAGAGTTTGAAAACTTCGATGATGTCCGTTCATTATATGACGGTGGCATTAGATTACATACTAATGCCCTTAGCAGAATTAGCCCTATACCATTGTTCAAGGAACTCTTCCGAACTGATGGTGAATCAGCCTTTAAGTTTCCACCGCCAAAAGTGATTCAAGTGAAACAGTCTGCATGGATGACTGATGAAGAGTTTGCAAGGGAGATGATTGCTGGTGTGAATCCACACATCATCAAAAGACTTCAGGAATTTCCACCAAAGAGCAAGCTAAATAGCCAACTCTATGGTGATAATACCAGCACAATAACCAAAGAGAAATTGCAACTAAATATGGGTGGGATGACAGTTGAACAAGCTATCCAAACAAACAAATTGTACATACTTGATTACCACGACTCATTATATCCATATTTGAGGAAAATAAATGCAGCTGATACAAAGGCATATGCTACTAGAACCATCCTTTTCTTACAAAATGATGGAACTTTGAAGCCATTAGCCATTGAGCTAAGTAGCCCACATCCTCAGACTGATAGCTTTGGTCCTATTAGTGATATTTACTTGCCTGCAAGTGATGGTGTTGAAGCTTCTATTTGGCTCCTTGCCAAGGCTTATGTTATTGTAAATGACTCATGCTATCACCAACTAATCAGCCATTGGTTGAATACTCACGCAGTTGTTGAGCCATTCATCATAGCAACAAATAGGCATCTTAGTGTGGTTCACCCTATTCAGAAACTTTTACTTCCGCACTATCGTGACACAATGAACATTAATGCACTTGCAAGGAATGTTTTGGTAAATGCAGAGGGCGTTATTGAATCAACATTCTTGCTGGGAAATTATTCTTTAGAATTGTCTGCTGTATTATATAAGGACTGGGTTTTCACAGAGCAGGGTCTGCCTAACGATCTACTCAAAAGAGGAGTGGCTGTTGAGGATCCAACTTCCCCACACGGCATTCGCCTTTTGATAGAGGACTACCCTTATGCTGCTGATGGATTAGAGATATGGGCTGCTATTAAGTCATGGGTTGAAGAATATGTGAATTTCTACTACAAGTCAGATGCTAATATTGCACAAGATTCTGAACTCCAGGCATTTTGGAAAGAGCTTGTAGAGGTGGGTCACGGAGACTTGAAAAATGCTACATGGTGGTTTAAGATGCAAACTCGTACGGAGTTGATTGAAACTTGCAGCATCCTCATATGGATTGCTTCAGCACTTCATGCAGCTGTTAATTTTGGACAATATCCGTACGGAGGATACATCCTTAACCGACCAACTAAAAGCAGAAGACTCATGCCTAAGAAAGGATCCCCCGAATATGATGAGCTTTCTAAGAACTACCAGAAGGCGTATTTGAGAACAATCACACCAAAGAATGACACCCTAACTGACTTGACCGTTATAGAGGTCTTGTCAAGACATGCTTCTGATGAACAATACCTTGGACAGAGAATTGAAGGTGATCTTTGGACTTCTGATTCACAACCAATAGAGGCTTTCAAGAGGTTTGGAACAAAGTTGGCTGAAATTGAACAAAAACTCACTCAAAGGAACAATGATAAGTCTCTAAGGAATCGATACGGACCTGTGATGATGCCATATACCTTGCTCTATCCTTCTAGTGAGGAAGGATTGACTTGCAGAGGCATTCCTAACAGTATCTCCATCTAA 2484 0.4062 MRGGINILGGVTKCIIDTAACSIGRSVALKLISATTSNGSGKGKVGKKTYLEGLVTSILTLGAGQSAFDIHFEWDSDMGVPGAFYIENHMLGEFFLVSLTLEDIPNHGTINFVCNSWIYNHKKYKTERIFFANKTYLPSETPPPLVYYRQEELKTLRGDGTGERKEWERIYDYDVYNDLGDPDKRASLARPVVGGSSTMPYPRRGRTGRKPAREDPKSESRSDFVYLPRDESFGHLKSSDFLVYLLKSASQNVIPQLLSAVTLQFNQPEFENFDDVRSLYDGGIRLHTNALSRISPIPLFKELFRTDGESAFKFPPPKVIQVKQSAWMTDEEFAREMIAGVNPHIIKRLQEFPPKSKLNSQLYGDNTSTITKEKLQLNMGGMTVEQAIQTNKLYILDYHDSLYPYLRKINAADTKAYATRTILFLQNDGTLKPLAIELSSPHPQTDSFGPISDIYLPASDGVEASIWLLAKAYVIVNDSCYHQLISHWLNTHAVVEPFIIATNRHLSVVHPIQKLLLPHYRDTMNINALARNVLVNAEGVIESTFLLGNYSLELSAVLYKDWVFTEQGLPNDLLKRGVAVEDPTSPHGIRLLIEDYPYAADGLEIWAAIKSWVEEYVNFYYKSDANIAQDSELQAFWKELVEVGHGDLKNATWWFKMQTRTELIETCSILIWIASALHAAVNFGQYPYGGYILNRPTKSRRLMPKKGSPEYDELSKNYQKAYLRTITPKNDTLTDLTVIEVLSRHASDEQYLGQRIEGDLWTSDSQPIEAFKRFGTKLAEIEQKLTQRNNDKSLRNRYGPVMMPYTLLYPSSEEGLTCRGIPNSISI* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0635 827 SMART LH2_4 1 133 IPR001024 GO:0005515
Mal5g0635 827 Pfam Lipoxygenase 145 810 IPR013819 GO:0016702|GO:0046872
Mal5g0635 827 PRINTS Plant lipoxygenase signature 312 328 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 267 288 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 167 183 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 200 219 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 102 120 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 351 370 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 739 753 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 128 149 IPR001246 GO:0016491
Mal5g0635 827 PRINTS Plant lipoxygenase signature 417 441 IPR001246 GO:0016491
Mal5g0635 827 MobiDBLite consensus disorder prediction 187 221 - -
Mal5g0635 827 Gene3D PLAT/LH2 domain 2 136 - -
Mal5g0635 827 Gene3D - 326 459 - -
Mal5g0635 827 MobiDBLite consensus disorder prediction 207 221 - -
Mal5g0635 827 ProSitePatterns Lipoxygenases iron-binding region signature 1. 482 496 IPR020833 GO:0016702|GO:0046872
Mal5g0635 827 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 135 827 IPR013819 GO:0016702|GO:0046872
Mal5g0635 827 PANTHER LIPOXYGENASE 10 827 IPR000907 GO:0016702|GO:0046872
Mal5g0635 827 Gene3D - 237 325 IPR027433 -
Mal5g0635 827 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 10 827 - -
Mal5g0635 827 PRINTS Lipoxygenase signature 482 499 IPR013819 GO:0016702|GO:0046872
Mal5g0635 827 PRINTS Lipoxygenase signature 502 522 IPR013819 GO:0016702|GO:0046872
Mal5g0635 827 PRINTS Lipoxygenase signature 464 481 IPR013819 GO:0016702|GO:0046872
Mal5g0635 827 Pfam PLAT/LH2 domain 36 131 IPR001024 GO:0005515
Mal5g0635 827 Gene3D - 460 826 - -
Mal5g0635 827 SUPERFAMILY Lipoxigenase 137 827 IPR036226 -
Mal5g0635 827 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 5 136 IPR036392 GO:0005515
Mal5g0635 827 Gene3D - 137 236 - -
Mal5g0635 827 ProSitePatterns Lipoxygenases iron-binding region signature 2. 509 519 IPR020834 GO:0016702|GO:0046872
Mal5g0635 827 ProSiteProfiles PLAT domain profile. 1 132 IPR001024 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0635 Mal-Chr5 10182017 10187816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0635 1 827 Acyl Lipid Metabolism Gene Families AT3G22400 55.425 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0635 K15718 - gmx:100816880 1386.32