Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0593 ATGCCGAAAACTAATTTTCAGGAATCTGGTTCTGTCATGAAGAGGTCTAAAAAGACAACTTTGGCTTCTCAAAATCTGTATAGTTGTGTTGCGACAGGACACCAGGATAGGCTTGGTGACATGCCAGATTGCCTTATTCATCACATTTTGTCGTTTATGGAAACAAGAGATGCAATTCGAACTTGTGTTCTATCGAAAAGGTGGAGGTATATTTGGACTTCAATTCCCTGCCTGTACTTCAGCAGCAAATCATTCACTCGGTTGGTTGATTTCAAGAAGTTTGTGTTGTGGGTTCTATCCCATCGCGATAACTCTCACATCAAAGTTCTTATTTACTATCGCTTTGGGGTAGATTATGCTACAGATCAGTATCTGTTGAATAAGGTTATTGAATATGCAGCATTACATGGTGTCAAAGAAATCAGAATAAATCTTCGGGCAAAAACCTCAGGCTGTCCACCGATTGAAATTCCTTTGCCACTTTTTACTTGTCAATCCTTGAAAAGGCTTGAATTAAAAGATTGCCATCCTACAAATGTCTCTTCTCCTTTTGGTTGCAAATCATTGGACATTTTGCACCTCGAACATTTTTCAATGTTTCCTACTGCAGCCGACTTTTCAAACCCATTTTCAAGTTTAGCCGAACTTTTTGGTTTTACAACATTGACAGCTTTGCACCTAAATAGCTTCTCCCTATGTTATACGGGAATGGAGCGTCTGGATCCGTTTGCTAATTGTGTCAATTTGAAGATTTTGCAATTAAGTGAAATGTCCTTTAAGTCGGATTTGAGTCCTAAGGATTTTGTGATATCTGCTCCCCGACTTAATAACTTGAGTCTAATTTGCAACCGCTTTAGATGTAAGATCATAGTTGCTTCACCACAGCTTCTCAATTTCACTTACTTGTATTCCACACCTTGTGCCTTCTTTGAGTTTAGTCTTCCTTCTTTGGATGGATTGATCATTGATATTCACGAATCACACGAACCTTTGGAAAAATCTCATCGAAATAAAAGAGAGGAGGCTTTGCATGGTGTGCTCAATATGTTACGGGGACATCATAAGGCTGAAGCTGTTAAACTATCCTTCTGTACAGTTGCGGTTACTTGTGGGGCTGCAGCCTTAGAAAAGCCAGAATGTTTGTCTTATAGTAAACGGAAGTCATTGAACTTTGGAGTGGGATCAACATATAAAATCTTCATCAACAAACTTGACCATATAACTGCCTATTTCCGCAATTGTTCTCAGCATGTAGACTTTGAGATTGTGAATATTTAG 1278 0.3881 MPKTNFQESGSVMKRSKKTTLASQNLYSCVATGHQDRLGDMPDCLIHHILSFMETRDAIRTCVLSKRWRYIWTSIPCLYFSSKSFTRLVDFKKFVLWVLSHRDNSHIKVLIYYRFGVDYATDQYLLNKVIEYAALHGVKEIRINLRAKTSGCPPIEIPLPLFTCQSLKRLELKDCHPTNVSSPFGCKSLDILHLEHFSMFPTAADFSNPFSSLAELFGFTTLTALHLNSFSLCYTGMERLDPFANCVNLKILQLSEMSFKSDLSPKDFVISAPRLNNLSLICNRFRCKIIVASPQLLNFTYLYSTPCAFFEFSLPSLDGLIIDIHESHEPLEKSHRNKREEALHGVLNMLRGHHKAEAVKLSFCTVAVTCGAAALEKPECLSYSKRKSLNFGVGSTYKIFINKLDHITAYFRNCSQHVDFEIVNI* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0593 425 Pfam F-box domain 40 76 IPR001810 GO:0005515
Mal5g0593 425 PANTHER F-BOX PROTEIN-LIKE 22 425 - -
Mal5g0593 425 SUPERFAMILY F-box domain 34 89 IPR036047 GO:0005515
Mal5g0593 425 SUPERFAMILY L domain-like 150 311 - -
Mal5g0593 425 Gene3D Ribonuclease Inhibitor 133 309 IPR032675 -
Mal5g0593 425 ProSiteProfiles F-box domain profile. 35 88 IPR001810 GO:0005515
Mal5g0593 425 SMART fbox_2 41 81 IPR001810 GO:0005515
Mal5g0593 425 PANTHER CYCLIN-LIKE F-BOX 22 425 - -
Mal5g0593 425 Gene3D - 24 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0593 Mal-Chr5 9356907 9358335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0593 36 199 EF-hand Containing Proteins AT5G41840 28.108 6.04e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0593 - - vun:114167379 697.582