Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0578 ATGACAAACAACACCACCATCCACCCTCAAGCCAAATCCACCACCAACGGCGGTGGTGCAGCCACAGCCGTTAAACCCTCATTCCCAGCGACAAAAGCGCAAATCTACGGCGCCACCCGTCCAACCTACCGTCCACAAACTCACCACCGTCGCCGTAGCAACCGTAACTGGTGTTGCACCATTTGTTGCTGGCTTCTCCTCATCCTCATCTTCATCCTCCTCCTCCTCGGCGCCGCTGGCACCGTCGTCTACTTTCTCTACCATCCCCAACGTCCATCCTTCTCCGTCACTTCCCTTAAACTCACCTCCTCTGAGTTTGACCTAACTCTTTCCACCACAAACCCTAACGAGAAAATAACATTTTCTTACCAACCAATCTCAGTTTCTCTTCTAGCCGGTGAACTCGACGTTGGTGACGGTGTTATTCCGTCGTTTGAGCATGGAACTAAGAATACTACCACGTTGAAAGCTTTGGTTGAGAGAAAGAGTGTGAAGAGGAAGTCATTGGAGTTGAAGATGAAGATGGAGACTAAGGTGGAGGCTAAGATGTGGGTTTTTAAGACACCACGTGTTGGAATCAATGTGCTTTGTGACGGTATCGATGTCGCCGGCGAGAAAGTGACGACGACGGCGGATGAGAAGTGTGCGGTGGATGTGAGGTTCAAGGTCTGGAAATGGACTCTTGGATGA 690 0.5058 MTNNTTIHPQAKSTTNGGGAATAVKPSFPATKAQIYGATRPTYRPQTHHRRRSNRNWCCTICCWLLLILIFILLLLGAAGTVVYFLYHPQRPSFSVTSLKLTSSEFDLTLSTTNPNEKITFSYQPISVSLLAGELDVGDGVIPSFEHGTKNTTTLKALVERKSVKRKSLELKMKMETKVEAKMWVFKTPRVGINVLCDGIDVAGEKVTTTADEKCAVDVRFKVWKWTLG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0578 229 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 227 - -
Mal5g0578 229 MobiDBLite consensus disorder prediction 1 22 - -
Mal5g0578 229 Pfam Late embryogenesis abundant protein 109 195 IPR004864 -
Mal5g0578 229 PANTHER CHAPERONIN CPN60-LIKE PROTEIN 7 227 - -
Mal5g0578 229 SUPERFAMILY LEA14-like 73 158 - -
Mal5g0578 229 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0578 Mal-Chr5 8983641 8984330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0578 32 183 EF-hand Containing Proteins AT5G21130 27.273 1.67e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0578 - - mtr:MTR_8g016370 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0389 4 3198517 3199311 Mal5g0578 5 8983641 8984330 PCT