Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0576 ATGGCTTCAGTTGGTGCAGTCAAATTCTTGTTATGCTTAGTTCTATTGCTATGGAACTACAACTTTCTACCTCATTGTCAAGGTAAACAAGACTACCCTTTTATTAAAAAAGCAAGTTCATTTTCATCACCATCAATTTCAACAACATCAATCAACAAAGCTTATGACTACATAATAGTGGGAGGTGGAACTGCAGGGTGTCCTTTAGCTGCAACACTCTCACAAAATTTTAGTGTATTATTACTTGAAAGAGGTGGTGTTCCTTTCACTAATCCCAATGTAACATTTCTTGAGAACTTTCACATTACCTTGGCAGACCTTTCATCAACTTCAGCTTCACAATATTTTGTTTCAACTGATGGAGTTTTCAATGCAAGGGGAAGAGTTTTAGGTGGTGGTAGTGCTATCAATGCTGGCTTCTATACTAGAGCAAGCTCAAGGTTTATCAATAAGGCAGGGTGGGATACCAAGCTAGTAAATGAGTCATACCCTTGGGTTGAGAAGCAAATTGTTCATCGTCCAAAGTTTTCGCCTTTTCAAAGAGCAGTGAGGGACGGCCTTATTGACAGTGGAGTCTCTCCTTTTAATGGCTTCACCTATGATCATATCTATGGAACAAAAGTTGGTGGAACCATTTTCGACAGATTTGGTCGCCGACACACAGCTGCCGAACTTCTTGCTTCTGGAAACCCTGACAAACTTACTGTTTTAGTCCATGCTACTGTCCAAAAGATTGTTTTTGATACAACAGGTAAGAGACCAAAAGCTATAGGGGTTATTTTCAATGATGAAAATGGAAAGCAACATGAGGCAATGTTGGGAAATGATATGCAAAGTGAAGTGATATTGTCTAGTGGAGCAATTGGTACTCCTCAAATGCTACTGCTAAGTGGAATTGGTCCTAAAGATGAACTTCAGAAGTTGAACATCTCAGTGGTTCTTAATAATCCTTTTGTTGGGAAGGGAATGATCGATAATCCGATGAACACAATTTTTGTTCCTTCTAATAGGCCAGTTCATCAGTCACTCATACAAACTGTAGGTATCACCAAGAAAGGTGTATACATTGAGGCTAGCAGTGGATTTAGTCAGTCCAACAGCAGCATTCACTGCCATCATGGTCTCATGTCACCCGAGATTGGACAACTTTCCACAATTCCTCCAAAGCAAAGATCAATAGAAGCTATCGAAGCTTACAAGAAGAATAAGCGAGACATGCCGATTGAAGCATTCAAGGGAGGCTTTGTCTTATCAAAAGTTGGCAGTGCTTGGTCAGTAGGTGAGCTCAAGTTGGTAAACACCAATGTGAATGACAATCCTGCTGTTACCTTCAACTACTTCAGTCATCCATACGATCTGAAGCGCTGCGTCGAAGGGATCAGCATGGCACTTAAAGTAGTCCAGTCAGAACACTTCACAAACTACACATTATGTAAAAGAGAAACCACAGAGAGACTTCTTAACCTAAGTGTGAAGACTAATGTCAACTTCATACCAAAACATCCCAATGACACAACTTCCCTAGAGCAATTCTGCAAAGACACTGTTATCACAATTTGGCACTACCATGGTGGATGTCATGTAGGGAAGGTTGTTAGTCCTGATTATAAGGTTCTTGATGTTGACAGACTCCGAGTTGTCGATGGATCAACGTTTACTGAGTCACCAGGAACAAATCCTCAAGCCACTGTTATGATGATGGGAAGGTACATGGGAGTGAAGATTTTGAGAGATAGGTTGGGAAAATTGGCTGGTATATAA 1761 0.4055 MASVGAVKFLLCLVLLLWNYNFLPHCQGKQDYPFIKKASSFSSPSISTTSINKAYDYIIVGGGTAGCPLAATLSQNFSVLLLERGGVPFTNPNVTFLENFHITLADLSSTSASQYFVSTDGVFNARGRVLGGGSAINAGFYTRASSRFINKAGWDTKLVNESYPWVEKQIVHRPKFSPFQRAVRDGLIDSGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNPDKLTVLVHATVQKIVFDTTGKRPKAIGVIFNDENGKQHEAMLGNDMQSEVILSSGAIGTPQMLLLSGIGPKDELQKLNISVVLNNPFVGKGMIDNPMNTIFVPSNRPVHQSLIQTVGITKKGVYIEASSGFSQSNSSIHCHHGLMSPEIGQLSTIPPKQRSIEAIEAYKKNKRDMPIEAFKGGFVLSKVGSAWSVGELKLVNTNVNDNPAVTFNYFSHPYDLKRCVEGISMALKVVQSEHFTNYTLCKRETTERLLNLSVKTNVNFIPKHPNDTTSLEQFCKDTVITIWHYHGGCHVGKVVSPDYKVLDVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGVKILRDRLGKLAGI* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0576 586 Gene3D - 172 518 - -
Mal5g0576 586 SUPERFAMILY FAD/NAD(P)-binding domain 47 578 IPR036188 -
Mal5g0576 586 ProSitePatterns GMC oxidoreductases signature 2. 286 300 IPR000172 GO:0016614|GO:0050660
Mal5g0576 586 Gene3D - 55 568 IPR036188 -
Mal5g0576 586 PANTHER GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE FAMILY PROTEIN 2 586 - -
Mal5g0576 586 Pfam GMC oxidoreductase 425 569 IPR007867 GO:0016614
Mal5g0576 586 SUPERFAMILY FAD-linked reductases, C-terminal domain 323 525 - -
Mal5g0576 586 ProSitePatterns GMC oxidoreductases signature 1. 127 150 IPR000172 GO:0016614|GO:0050660
Mal5g0576 586 PANTHER OSJNBA0019K04.7 PROTEIN 2 586 - -
Mal5g0576 586 PIRSF Alcohol_oxidase 35 585 IPR012132 GO:0050660
Mal5g0576 586 Pfam GMC oxidoreductase 55 327 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0576 Mal-Chr5 8918780 8925584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0576 8 581 Miscellaneous Gene Families AT3G56060 49.310 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0576 K15403 - gmx:100788704 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0387 4 3158144 3164671 Mal5g0576 5 8918780 8925584 PCT