Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0575 ATGTCAAATAGTGAGACTTGTTGTTCAACTCAGCTTATTGATGGAGATGGAGGATTCAATGCTTCTGGGATTGAAAAGTTTATGAAGGAAGTGAAATTGGGTGAATGTGGGCTTTCATATGCTGTGGTTTCTATTATGGGGCCACAGAGTAGTGGTAAGAGTACACTATTAAATAATTTGTTTGGTACCAATTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACGCTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTCGAAAAACAGAGTGCCCTGTTTGCTCTTGCTGTCTCAGATATAGTGCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCGAATAAGCCTCTTTTGAAAACTGTCTTTCAGGTTATGATGAGGTTGTTTAGTCCACGCAAAACAACACTGTTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCTGTCCCTAAACCACAGGCCCACAAGGAAACCCCACTAAGTGAATTTTTCAACGTTGAAGTTGTTGCGCTTTCTAGTTATGAAGAAAAGGAAGATCAATTTAGAGAGCAGGTTGCCAGCTTGAGGCAACGTTTTCATCAGTCTATTGCTCCTGGTGGACTTGCAGGGGATCGGCGTGGAGTAGTTCCTGCTTCTGGATTTTCTTTTAGCGCTCAGGAAATATGGAAAGTCATTAAGGAAAACAAAGATCTTGACCTTCCTGCACACAAGGTTATGGTTGCAACTGTACGATGTGAAGAAATTGCCAATGAGAAATATGCCGCTTTTGTTGCAAATGAGGAATGGTGTCAATTGGAAGAGACTGTGCAATCTGATCCTATTCCTGGATTTGGGAAAAAAATCAATTCACTTCTTCATGCTTCTTTTTCAGAGTATGATGCTGAGGCCACTTATTTCGATGAAGGTGTTAGAACTGCAAAACAAAAGCAACTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCTTACCAATCTGCACTGGGACATATTAGATCTGTAACTTTGGAAAAATTCAAGGAGACATTTGAAAAGGCTTTGAAAGGCGGGGAAAGGTTTTCTGCAGCTGCTAATAATTGTATTGAGTCTTGTGTGGCTCAATTTGATAAAGCATGTGCAGATGTTGTTATTGAACTAACAAATTGGGATACATCTAAAGTACGAGAGAAACTGCTGCGTGATATTGATGCACATGTTGCATCTGTGCGTGAAGCTAAGATTTCTGAACTTACTTCCTCATATGAGGAAAAACTGAAAGTATCTTTGTCTGGACCTGTCGAAGCTCTTTTAGACGGAGCTAATACTGATACTTGGCCATCAGTAAGGAGCCTTCTTAAGCGTGAGATTCAATCAGCAGTTTTAGGGTTTTCTGCTGCGCTTAATGGGTTTGATATGGATGAAGAAACAAGACAAAACATGATTTTGAGTTTAGAGTATTATGCAAGGAGTGTGGTAGAAGGAAAGGCTAGGGAAGAAGCTGGAAGGGTTTTGATCCGTATGAAGGACAGGTTTACAATGTTATTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGGAGTGAAGATATTCGAGCCATCACTAAAACTGCTCGCTCTGCTTCTTTGAAGTTGCTCTCTGTTATGGCCGCACTTCGTTTGGATGATGGTGATAAAGATGATATTGAGAAAACATTAGCAGTTGCATTGCTGGATTCATCAAGCAGTGCTAATAAAAATAGGAGTATCACAGCTGGTGATCCGCTAGCTACTAGCAATTGGGAACAGATTCCACCATCTAAGACATTGATTACACCTGTCCAGTGCAAATCTTTGTGGAGGCAATTCAAGATGGAGACTGAGTACAGTGTTTCTCAAGCCATTTCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATACTTGCTTTGGTTATTCTGGGATTCAATGAATTTATGACCCTACTAAAAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTGTGGGTGCAACTTAACATTGCCGGTGAATTTCGTCATGGAATGCTTCCCGGACTCATTTCCTTGTCTACCAAGTTAGTTCCAACTATCATGAACCTTATCAAAAGACTAGCAGAAGAGGGGAATAACCCTGCAGCTAACAATCCTCAGAGAAACACATCACAAAACAACACCGCTGTTCCTGTTGGCAGTTCTGTTTCATCTAGCTCTTCATCTAACATAACCTCATTGGATAATGGAAATCGATATACCAGTTCATCAAAAGATGAGTAA 2433 0.4102 MSNSETCCSTQLIDGDGGFNASGIEKFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNNLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEDQFREQVASLRQRFHQSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFVANEEWCQLEETVQSDPIPGFGKKINSLLHASFSEYDAEATYFDEGVRTAKQKQLQEKLLQLVQPAYQSALGHIRSVTLEKFKETFEKALKGGERFSAAANNCIESCVAQFDKACADVVIELTNWDTSKVREKLLRDIDAHVASVREAKISELTSSYEEKLKVSLSGPVEALLDGANTDTWPSVRSLLKREIQSAVLGFSAALNGFDMDEETRQNMILSLEYYARSVVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGSEDIRAITKTARSASLKLLSVMAALRLDDGDKDDIEKTLAVALLDSSSSANKNRSITAGDPLATSNWEQIPPSKTLITPVQCKSLWRQFKMETEYSVSQAISAQEANKRNNNWLPPPWAILALVILGFNEFMTLLKNPLYLGVIFVGFLLIKALWVQLNIAGEFRHGMLPGLISLSTKLVPTIMNLIKRLAEEGNNPAANNPQRNTSQNNTAVPVGSSVSSSSSSNITSLDNGNRYTSSSKDE* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0575 810 MobiDBLite consensus disorder prediction 763 803 - -
Mal5g0575 810 CDD GBP 36 239 - -
Mal5g0575 810 Gene3D - 19 249 IPR027417 -
Mal5g0575 810 Coils Coil 218 238 - -
Mal5g0575 810 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 3 788 - -
Mal5g0575 810 PANTHER PROTEIN SEY1 3 788 IPR008803 -
Mal5g0575 810 Hamap Protein SEY1 [SEY1]. 9 765 IPR008803 -
Mal5g0575 810 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Mal5g0575 810 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Mal5g0575 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 249 IPR027417 -
Mal5g0575 810 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Mal5g0575 810 MobiDBLite consensus disorder prediction 761 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0575 Mal-Chr5 8902160 8911113 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0575 K22698 - gmx:100780006 1359.74