Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0552 ATGTCTAACAATATTGTGATTGTTTTCGACTTTGACAAAACAATCATTGATTGTGATAGTGATAATTGGTTGATCGATGAATTGGGTTTTACTGATTTGTTCAATCAGCTCCTTCCAACAATGCCTTGGAATTCTGTTATGGACAGGATGATGATGGAGTTTCATTCAAATGGTATAACCATTGAAGATATTGAAAAGGTTCTTCATAGGATTCCAATTCATCATAGAATAATACCTGCAATTAAATCAGCCCATGCTTTAGGGTGTGATCTGAGGATTGTGAGCGATGCCAATATGTTTTACATTGAAACTATATTGAAGCATTTGGGAATAACTGAATGCTTCTCAGAGATTAACACTAATCCTAGTTATGTTAATCAAGAAGGAAGGGTTAGGATTTCACCTTACCATGATTTCAACAAGGCTTCACATGGTTGCAATAATGTTTGCCCTCCAAACATGTGCAAGGGTTTAATCATTGATAAAATCCAAAATACAATTTCTGATGGGGATAACAAGAGGTTTATCTACCTTGGTGATGGTGCTGGGGATTATTGCCCTAGCTTGAGGCTTAGAGAAAGAGATTTCATGATGCCAAGGAAGAATTATCCAGTGTGGGATTTGATATGCAAAGACCCTTCACTTATCAAGGCTGAAATCCATGGTTGGTGTGATGGAGAAGAGCTTGAACAAATTTTGATTCAATTGATCAACAAAATTATCATTGAGGAAAATGCTAAATTCATTGCTTCTGATTGCAAGCTGCAAACTCTATCTATTCATGTGCCTAAAGCTCTTCCAGTTAGACCATAA 813 0.3629 MSNNIVIVFDFDKTIIDCDSDNWLIDELGFTDLFNQLLPTMPWNSVMDRMMMEFHSNGITIEDIEKVLHRIPIHHRIIPAIKSAHALGCDLRIVSDANMFYIETILKHLGITECFSEINTNPSYVNQEGRVRISPYHDFNKASHGCNNVCPPNMCKGLIIDKIQNTISDGDNKRFIYLGDGAGDYCPSLRLRERDFMMPRKNYPVWDLICKDPSLIKAEIHGWCDGEELEQILIQLINKIIIEENAKFIASDCKLQTLSIHVPKALPVRP* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0552 270 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 201 IPR006384 GO:0016791
Mal5g0552 270 SUPERFAMILY HAD-like 5 189 IPR036412 -
Mal5g0552 270 PIRSF PLP_phosphatas_PHOSPHO2 1 241 IPR016965 GO:0016791
Mal5g0552 270 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 189 - -
Mal5g0552 270 Pfam Putative Phosphatase 5 237 IPR016965 GO:0016791
Mal5g0552 270 PANTHER INORGANIC PYROPHOSPHATASE 4 267 - -
Mal5g0552 270 Gene3D - 1 190 IPR023214 -
Mal5g0552 270 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 267 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0552 Mal-Chr5 8568201 8574435 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0552 K13248 - gmx:100785878 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0552 5 8568201 8574435 Mal4g0371 4 2800089 2802059 PCT