Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0549 ATGTCAAATAATATTGTGATAGTTTTCGACTTCGACAAAACCATAATTGATTGTGACAGTGATAATTGGGTTATTGATGAATTGGGTTTCACTGATTTGTTCAATCAGCTACTTCCCACCATGCCTTGGAACTCCCTCATGGACAGGATGATGATAGAGCTTCACTCTAATGGTAAAACCATTGAAGAGATTGAAAAAGTTCTTCATAGGATTCCAATTCATCACAGAATAATACCAGCTATTAAATCAGCTTATGCTTTAGGGTGTGACTTGAGGATTGTTAGTGATGCTAATACGTTTTTCATTGAAACAATTTTGAAGCATTTGGGAATAAGTGAGTGTTTCTCAGAGATTAACACTAATCCTGGTTATGTTAATCAAGAAGGAAGATTAAGAATTTCACCTTACCATGATTTCAACAAGGCTTCACATGGTTGCAACAATGTCTGCCCTTCAAACATGTGCAAGGGTTTAATCATAGATAGAATCAAAAATTCAATTTCTGAAGTGGATAAAAAGAGGTTTATCTACCTTGGTGATGGTGCTGGGGATTATTGCCCTAGCTTGAGGCTTAGAGAAAGAGATTTCATGATGCCAAGGAAGAATTATCCAGTGTGGGATTTGATATGCAAAGACCCTTCACTTATCAAAGCTGAAATTCATGGTTGGAGTAATGGAGTAGAGCTTGAACAAGTTTTGATGAAGTTGATCAACAAAATTATCATTGAGGAAAATGCTCAATTCATTTCATCTGAGTGCAAACTACAAACTCTATCATTTCGTGTGCATGAAACCATGCCTAAAGCTCTCAGTTAG 816 0.3627 MSNNIVIVFDFDKTIIDCDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMIELHSNGKTIEEIEKVLHRIPIHHRIIPAIKSAYALGCDLRIVSDANTFFIETILKHLGISECFSEINTNPGYVNQEGRLRISPYHDFNKASHGCNNVCPSNMCKGLIIDRIKNSISEVDKKRFIYLGDGAGDYCPSLRLRERDFMMPRKNYPVWDLICKDPSLIKAEIHGWSNGVELEQVLMKLINKIIIEENAQFISSECKLQTLSFRVHETMPKALS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0549 271 Gene3D - 1 190 IPR023214 -
Mal5g0549 271 PANTHER INORGANIC PYROPHOSPHATASE 4 270 - -
Mal5g0549 271 PIRSF PLP_phosphatas_PHOSPHO2 1 241 IPR016965 GO:0016791
Mal5g0549 271 SUPERFAMILY HAD-like 5 188 IPR036412 -
Mal5g0549 271 Pfam Putative Phosphatase 5 237 IPR016965 GO:0016791
Mal5g0549 271 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 201 IPR006384 GO:0016791
Mal5g0549 271 PANTHER PHOSPHATASE, ORPHAN 1, 2 4 270 IPR016965 GO:0016791
Mal5g0549 271 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0549 Mal-Chr5 8543176 8544236 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0549 K13248 - gmx:100785878 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0549 5 8543176 8544236 Mal4g0370 4 2790324 2792830 PCT