Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0527 ATGTCTTCTTCCTTCAAATTCAAATGCTTCCAATATTTTTTCATCATCATATTCATATTACATGTCTTTGCTGCAACACCAATTTTGTCATTCAGCAATTTTCTAGACAGTGCCAGGAGTCCTGAGGTTTTTGATTGGATGATCAATATCAGATGGAAGATTCATGAGAATCCAGAATTGGGTTATGAAGAATTTGAGACAAGTGAACTCATAAGAACAGAATTGGATAAAATGGGCATTCCTTATAAACATCCAGTTGCAATCACTGGTGTCATTGGTTTCATTGGAACTGGATTCTCTCCTTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTCCTATGCAGGAAATGGTTGAATGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTTACCATGTTACTTGGGGCTGCAAAGATTCTCAAACAGCATGAAAAAGAGATACAAGGAACCGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGTGGAGGGGCTAAGAAAATTTTAGAAGCTGGGGCATTAGAAAATGTCACTGCTATCTTTGGATTGCATATTGATCCTGACTTACCTATTGGTGAAGTGTCCTCTAAGTCTGGTCCAATATTGGCAGGAAGTGGCTTCTTTGAAGGAAAAATAAGTGGAAAGGGAGGTCATGCAGCTATTCCTCAACAAGCTATAGATCCCATATTAGCAGCTTCCAGTGCAATTATTAGCTTACAACACCTTGTTTCTCGCGAGGCTGATCCTTTAGACTCCCAGGTTGTGACGATTGCAAAGATCCAAGGAGGTAGTGCATTCAATGTTATTCCAGATTATATCACATTTGGTGGTACCTTCCGAGCCTTTTCTAAACAAAGCTTCAACCAACTGAGACATCGGATTGAAGAGGTTATCATTGGGCAAGCTGCTGTGCATAGGTGCAATGCAACTGTGGACTTCCTTCATGGAGTGAAACCTTTTTATCCTCCAACTGTAAACAATGGTGACTTGCATGAACATTTTGTGAATGTTGCAGTGAATATGCTTGGTATCGATAAAGTTGATAGTGTCATGACACCATTCATGGGAGCTGAAGACTTTTCATTCTATCAAGAGGTTATACCTGGATACTTCTTCATGCTTGGAGTGAAAAATGCTTCACATAAGCGGTTTGAGTCATTATTACACTCACCTTATCTCGAAATCAATGAAGATGGACTCCCTTATGGAGCTGCACTTCATGCGTCTTTAGCTGCTAGTTATCTTCTTAAACATCAGCAGGATATTGTACCTGGTGTTGAGAGAAAATATCATGATGAATTATAA 1332 0.3994 MSSSFKFKCFQYFFIIIFILHVFAATPILSFSNFLDSARSPEVFDWMINIRWKIHENPELGYEEFETSELIRTELDKMGIPYKHPVAITGVIGFIGTGFSPFVALRADMDALPMQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEIQGTVVLVFQPAEEGGGGAKKILEAGALENVTAIFGLHIDPDLPIGEVSSKSGPILAGSGFFEGKISGKGGHAAIPQQAIDPILAASSAIISLQHLVSREADPLDSQVVTIAKIQGGSAFNVIPDYITFGGTFRAFSKQSFNQLRHRIEEVIIGQAAVHRCNATVDFLHGVKPFYPPTVNNGDLHEHFVNVAVNMLGIDKVDSVMTPFMGAEDFSFYQEVIPGYFFMLGVKNASHKRFESLLHSPYLEINEDGLPYGAALHASLAASYLLKHQQDIVPGVERKYHDEL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0527 443 CDD M20_IAA_Hyd 47 412 IPR044757 GO:0009850|GO:0016787
Mal5g0527 443 PANTHER PEPTIDASE M20 FAMILY MEMBER 10 443 IPR017439 GO:0016787
Mal5g0527 443 PIRSF Amidohydrol_AmhX 34 428 IPR017439 GO:0016787
Mal5g0527 443 Pfam Peptidase family M20/M25/M40 104 420 IPR002933 GO:0016787
Mal5g0527 443 Pfam Peptidase dimerisation domain 214 307 IPR011650 -
Mal5g0527 443 SUPERFAMILY Zn-dependent exopeptidases 42 426 - -
Mal5g0527 443 Gene3D - 212 330 - -
Mal5g0527 443 SUPERFAMILY Bacterial exopeptidase dimerisation domain 212 331 IPR036264 -
Mal5g0527 443 Gene3D Zn peptidases 47 408 - -
Mal5g0527 443 TIGRFAM amidohydrolases: amidohydrolase 47 411 IPR017439 GO:0016787
Mal5g0527 443 PANTHER AUXIN CONJUGATE HYDROLASE 10 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0527 Mal-Chr5 8257135 8278691 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0527 K21604 K14664 gmx:100789077 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0527 5 8257135 8278691 Mal5g0527 5 8257135 8278691 ECH
Mal4g0356 4 2645762 2660763 Mal5g0527 5 8257135 8278691 PCT