Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0470 ATGAAGATCTTCGTTTTCTGTTTGGTTACATTCTTAGCAACATGTCATGGTAATGTTCAAAACCATGAGCATTATTCAAATAACCAAATTTTCCCACTTCGAGTAAAATCTGGTCCAGGTGGACACTACATTCAAGAAGTATCATGTGCTAGTTGGAGACTTGGTGTTGAAGCACACAATATCATAAATTGGAAAACTATTCCACAAGAATGTGAAAAATATGTTGGAAACTATATGCTAGGTGATCAATATAGAGCCGACTCTAAAGCAGTTAACCGTGAAGGTTATTTCTATGCTAAGACTCTCAATCTAAGTGGAAATGGCAAAGATATATGGGTGTTTGATATTGATGAAACTTCACTATCTAATCTTCCATATTATGCTAAACATGGATTTGGGGTGGAACCATACAACGACACATTGTTCAATCAATGGGTTGATCTTGGAACAGCACCAGCACTGCCTGAATCTAAAAAATTGTACAATAAATTGTTGTCTCTTGGTATCAAGATTGCATTCTTAACAGGAAGACCACTCAAACAGAAAGACATAACAGCTAAGAATTTGAGACGTGCCGGCTACAACAAGTGGGAAAAGTTAATTCTCAAGGATACATCAATATATCATGGTAAAACAGCAGTTACATACAAATCATCTGAGAGAAAGAAATTGGAGAAAGAAGGATATAGAATTGTTGGAAACATTGGAGATCAATGGAGTGATATTCTTGGAACCAACACTGGTGAAAGGACTTTCAAACTCCCTGATCCTCTCTACTACATTGCCTAA 789 0.3638 MKIFVFCLVTFLATCHGNVQNHEHYSNNQIFPLRVKSGPGGHYIQEVSCASWRLGVEAHNIINWKTIPQECEKYVGNYMLGDQYRADSKAVNREGYFYAKTLNLSGNGKDIWVFDIDETSLSNLPYYAKHGFGVEPYNDTLFNQWVDLGTAPALPESKKLYNKLLSLGIKIAFLTGRPLKQKDITAKNLRRAGYNKWEKLILKDTSIYHGKTAVTYKSSERKKLEKEGYRIVGNIGDQWSDILGTNTGERTFKLPDPLYYIA* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0470 262 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 5 261 - -
Mal5g0470 262 Gene3D - 44 262 IPR023214 -
Mal5g0470 262 CDD HAD_VSP 75 261 - -
Mal5g0470 262 PIRSF VSP 1 262 IPR014403 -
Mal5g0470 262 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 41 261 IPR005519 -
Mal5g0470 262 PANTHER VEGETATIVE STORAGE PROTEIN 1-RELATED 5 261 - -
Mal5g0470 262 SUPERFAMILY HAD-like 103 246 IPR036412 -
Mal5g0470 262 TIGRFAM plant-AP: plant acid phosphatase 44 262 IPR010028 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0470 Mal-Chr5 6966409 6970366 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0470 - - gmx:547669 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0470 5 6966409 6970366 Mal5g0470 5 6966409 6970366 ECH