Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0396 ATGAGAAGTGAGAGACAAGAATTAGTGATAGCAGAAGTGAAGAGGCAACTATGGTTAGCAGTTCCTCTGACCTCAGTTGGAATCCTACAATACATTCTACAAACAATTTCTATTATGTTTGTTGGACATCTTGGTACTCTCCCTCTTTCTGGTGCTTCCATGGCCACTTCCTTTGCATCTGTCACTGGCTTCACCTTACTGATGGGAATTACTAGTGCACTGGACACATTTTGTGGTCAATCAAATGGAGCAGAACAGTACCATATGCTTGGAATACACATGCAAAGAGCAATGCTTGTTGTCTCAATTGTGAGTGTATTCCTTGCCATCATATGGGCAAATACAGAACACATTTTAGTTGTTATGCATCAGGACAAAGCCATATCCAAGGAAGCTGGTTCATACGCATCTTCCATGATCCCAAGTTTGTTTGCATATGGTCTTCTTCAGTGCATTCTCAAGTTCTTGCAAACACAAAACATTGTTCTCCCAATGGTGATAACTTCTGGAATTGCAGCTTTGCTTCACACCCTTTTATGCTGGCTTTTGGTTTTTAAATTAAAGCTTGGAAGTAAAGGGGCAGCTATATCCAATTCTATATGTTATTGGGTCAATGTGCTTTTGATTTCACTCTATGTGAAATTCTCTTCTTCTTGTAAACAAACATGGACAGGGTTTTCAAAGAGAGCCTTGCACGATCTCGTTGACTTCCTTAAACTTGCTCTCCCTTCAGCTCTCATGGTCTGCTTGAAAGTGTGGACATTTGAATTGATGGTTCTCATGTCTGGTCTTCTTCCTAATCCAGTAATAGAAACTTCAGTACTTTCAATATGCCTTAATACATTTGGTCTAGCTTGGATGATCCCTTTTGGATGCAGTTGTGCTGTCAGCATACGGGTGTCGAATGAACTGGGGGGCGGTAATCCAAAAGGTGCAAGTCTAGCAGTTCGTGTGGCGTTATCTATATCCTTCATTGCAGCCTTATTTATGGTTTTAAGCATGATTCTAGCAAGGAAAGTGTGGGGGCATCTTTACAGTGATGACAAACGTGTTATCAGATATGTGTCAGCCATGATGCCAATTTTGGCTATTTCCAGTTTCTTAGATGCCATTCAAAGTACACTTTCAGGTGTTCTTGCAGGATGTGGGTGGCAGAAGATCGGTGCCTATGTGAATCTTGGTTCATTTTATGTTGTAGGTGTACCATGTGCCGTTGTATTAGCCTTTTTTGTACACATGCATGCCATGGGGCTCTGGTTAGGAATCATCTCTGCATTTATTGTGCAAACCTTACTTTACATCATTTTTACCATTCGTTCTAACTGGGAGGAAGAAGCAACGAAAGCTCAAAGCAGAGTAGAGCGCTCAACCACCGCGCCAAATACTACCCTCAGAGACAACATTTTACCTTCTCAAAAACTTGAACAAATTCCCTAA 1437 0.412 MRSERQELVIAEVKRQLWLAVPLTSVGILQYILQTISIMFVGHLGTLPLSGASMATSFASVTGFTLLMGITSALDTFCGQSNGAEQYHMLGIHMQRAMLVVSIVSVFLAIIWANTEHILVVMHQDKAISKEAGSYASSMIPSLFAYGLLQCILKFLQTQNIVLPMVITSGIAALLHTLLCWLLVFKLKLGSKGAAISNSICYWVNVLLISLYVKFSSSCKQTWTGFSKRALHDLVDFLKLALPSALMVCLKVWTFELMVLMSGLLPNPVIETSVLSICLNTFGLAWMIPFGCSCAVSIRVSNELGGGNPKGASLAVRVALSISFIAALFMVLSMILARKVWGHLYSDDKRVIRYVSAMMPILAISSFLDAIQSTLSGVLAGCGWQKIGAYVNLGSFYVVGVPCAVVLAFFVHMHAMGLWLGIISAFIVQTLLYIIFTIRSNWEEEATKAQSRVERSTTAPNTTLRDNILPSQKLEQIP* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0396 478 Pfam MatE 243 405 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal5g0396 478 Pfam MatE 24 182 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal5g0396 478 CDD MATE_eukaryotic 12 448 IPR045069 GO:0042910|GO:1990961
Mal5g0396 478 PANTHER PROTEIN DETOXIFICATION 1 454 - -
Mal5g0396 478 PANTHER MULTIDRUG RESISTANCE PROTEIN 1 454 - -
Mal5g0396 478 TIGRFAM matE: MATE efflux family protein 26 419 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0396 Mal-Chr5 6025641 6028144 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0396 K03327 - gmx:100776083 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0396 5 6025641 6028144 Mal6g3678 6 107532298 107537222 ECH
Mal5g0396 5 6025641 6028144 Mal5g0396 5 6025641 6028144 ECH