Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0390 ATGCATAAACATGGTAGAAAGAAATCTAAACTATCAAAATCAAAATCTAGTAGAGGCCATTCACAAAGTCAAAGCATTCCACCTCACGGCGGCTCCAGTGTCCGCCGGCCAGAAGCTTCGCCGGCAACCGGGAACACCAGTCAAGGCTGCAAAAGCACCTTCGAGGTTGGGAGCTCTAGCAAGGGGAACAAGGAGATGGCGAGGTTGATGCTGAATCCGGTGAAGAATCACAATCCGGAAACGTACGAGGACTTGGAATTGGATATCTCTTCTCTGCTTTTCAGTTCGTTGGAGAGACACCTTCCGCGGCACTTGCTCCGTGCGCCTCGTGAACACAAAGCTTCATACATGCGCGAGATTTTGGACGAATACGCGCCTCCAGCATTGCGCTACAGAGATGAAAAGCAAAAAGAATATAGAGAGAAGATAATGTCGAGTTATCAGCCTCTGCATCAAGAGTTGTATACTATGGATCCTGTAGCATTTTTTGTACCGACATTTCTGAAAGCAATTAATGATAATAAGGAACAAAGCTTTAGAAGTATACTGTCTGAACCCGCCCCAGGCATTTTTATATTTGAAATGCTTCAACCACATTTTTGTGAGTTACTGATATCTGAGGTTGAACATTTTGAGAAGTGGGCTAAGAGAACAAAATTATGTGTAATGCGTCCCAATACAATGAATCGATATGGTGCTGTACTTGATGACTTTGGCCTTCAAACCATGCTTAACAAGTTTATGGAAGATTTTATTTCTCCATTGTCAAAAATGCTCTATGCAGATGTTGGTGGATCAACCCTGGATTCTCACCATGGGTTTATTGTTGAATGTGGTATGCATAGAGATATTGAAACGGAATTCCATGTGGATGACTCAGAAGTTACCTTAAATGTTTGCCTGGGTAGGCAATTTTCGGGAGGAGAGTTGTATTTTCGGGGCATGCGATGCGATAAACATTTACATACTATAAGTCATTCAGAGGAGATCTTTGATTATTCGCATGTTCCTGGTTGTGCTGTGCTTCATCATGGCCGTCATCGCCATGGGGCTAGAGCCACATTTGCTGGTCATCGGGTCAACCTACTTCTGTGGTGCAAAAGTTCTTTTTATAGAGAAATGCAAAAGTTTAAAAGAGATTTCTCCAGCTGGTGTGTTGAGTGCGATCAAGAGAAGAAAGATAAGAAAGATAAGCTTCTCTCGGAATTTGATACTACCGGAATGGAATTGCTGAGGAGGGAAGGGGGAACAACTGCATAA 1260 0.4302 MHKHGRKKSKLSKSKSSRGHSQSQSIPPHGGSSVRRPEASPATGNTSQGCKSTFEVGSSSKGNKEMARLMLNPVKNHNPETYEDLELDISSLLFSSLERHLPRHLLRAPREHKASYMREILDEYAPPALRYRDEKQKEYREKIMSSYQPLHQELYTMDPVAFFVPTFLKAINDNKEQSFRSILSEPAPGIFIFEMLQPHFCELLISEVEHFEKWAKRTKLCVMRPNTMNRYGAVLDDFGLQTMLNKFMEDFISPLSKMLYADVGGSTLDSHHGFIVECGMHRDIETEFHVDDSEVTLNVCLGRQFSGGELYFRGMRCDKHLHTISHSEEIFDYSHVPGCAVLHHGRHRHGARATFAGHRVNLLLWCKSSFYREMQKFKRDFSSWCVECDQEKKDKKDKLLSEFDTTGMELLRREGGTTA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0390 419 SMART p4hc 188 367 IPR006620 GO:0005506|GO:0016705|GO:0031418
Mal5g0390 419 MobiDBLite consensus disorder prediction 38 60 - -
Mal5g0390 419 MobiDBLite consensus disorder prediction 1 15 - -
Mal5g0390 419 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 47 402 - -
Mal5g0390 419 PANTHER 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 47 402 - -
Mal5g0390 419 MobiDBLite consensus disorder prediction 16 30 - -
Mal5g0390 419 Gene3D q2cbj1_9rhob like domain 186 368 - -
Mal5g0390 419 MobiDBLite consensus disorder prediction 1 61 - -
Mal5g0390 419 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 250 368 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0390 Mal-Chr5 5935055 5944904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0390 - - mtr:MTR_8g106610 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0390 5 5935055 5944904 Mal6g3690 6 107923828 107928428 ECH
Mal5g0390 5 5935055 5944904 Mal5g0390 5 5935055 5944904 ECH