Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0359 ATGAGCCGGCCAATGGAAGAAGATGCTGTCGGGAAGAATGAGGAAGAGGAGTTCAACACCGGACCACTATCCGTACTCATGATGAGTGTGAAAAACAATACACAGGTATTGATCAATTGTCGTAACAACAAAAAGCTTCTAGGCCGTGTCAGGGCTTTTGATAGACACTGCAATATGGTTCTTGAAAATGTCAGGGAAATGTGGACTGAGGTGCCTAAGACTGGTAAAGGGAAGAAAAAGGCTCAGCCAGTAAACAAGGATCGTTTCATCAGCAAAATGTTCCTTCGTGGTGATTCTGTCATCATTGTTCTTAGGAACCCCAAATAA 327 0.4343 MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0359 108 Pfam LSM domain 29 103 IPR001163 -
Mal5g0359 108 Gene3D - 16 108 - -
Mal5g0359 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 IPR027248 GO:0008380|GO:0030532
Mal5g0359 108 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 108 - -
Mal5g0359 108 CDD Sm_D2 18 107 IPR027248 GO:0008380|GO:0030532
Mal5g0359 108 SMART Sm3 26 105 IPR001163 -
Mal5g0359 108 SUPERFAMILY Sm-like ribonucleoproteins 21 106 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0359 Mal-Chr5 5587090 5588397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0359 K11096 - gmx:100792526 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0359 5 5587090 5588397 Mal5g0359 5 5587090 5588397 ECH