Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0264 ATGGACGATGGGCGGGAGTGGGAGTCCGGTTTGGATAAAGATGGTTACAAAAATGAAGATGAAGCTGAGAAATCAAGCGTAAAAAATCTAGAAGAAGAGGAGACAGACATCCAGGGTGAAGGAAATAAGAACACAAATTTGGGTTGGTTAGCTGTTGCTGCAGCTGTTGCATGCATAAGAGAAGAAAAACAAGAAGATGGAGTTACATTGTCTGGATTGAGACATAGTCCCGTTCTCAACAAAGCCAAAGTCCACAAGGGTAAAGAGGTGATGATGGAGACAACAACCTTGGATGCTCCGAATGGTGCTCCAGCTGTTGATTTTTCTGCTACTGAAGCTGGTGAAGGAAGTGGAGGACATGGAAATGGTGGTGATGAAGAAAATGGGGATGATGATCTTGGAGTTGAAGAAAGACTTCCATCTCTTGATGATGGCTTCTATGAAGTTGAAGCTATTCGTCGTAAGAGATACCGCAAGGGTAAGTTGGAGTACTTTGTGAAATGGTTGGGATGGGGTGAGGCAGCAAACACTTGGGAGCCTCCAGATAATTTAGTTGGTGTTCCTGAAATTATTGAAGCTTTTGAGAACGGCTTGTTGAAATCGACAAAGCATCGGAAGCACAAACGCAAGGATGTGGTTCATCAAACTCAAATCAAGAAGAGGGTGGAACGTTCCGCCACTCCTTACAGCCTTAGATGCTTAAAAACTAGCTCAACTAGCAAAAGCCATTCACATGTAGCTGCTAACAACCATTCGGCGCCTGCCTCTCTCAGTGAACAACCTGGTATTCCTCATATTCCCGACTTTCCTGCATTTCCTCAGACTGTGCTGTTTGCCGATGAAGTTGAAAACAATGATGATGGAAGGAATCTTCAAGAAGACAACCATGCTTATGACAATAAGATTGCAAATCCTTCAGAAGAGGTTCCTCGAAATAACGAGGAAAAGGAGTATGATCCTAAGCTTAGTGAACTTAAAGCTACGACAACCAATGAAAATGAGGCAGACAAACTTAAAGCTGCGACAACCAATGGAAATGACGCAGACAACCTCGCAATAAAGTTTCAAGAAGCTAAGGTTCCTACAGGAGAAACTAGCATGAGTGATCAACCAATGGCGGTTTGCACAGAACTGAATTCCAAAAGAAAAGCGGTTAGCACAGAACCAGTTCAAAATGGCACCGGAAGATCAAGAGGCAGGCCAAGAAAATCTATTTCTGTGAAGAGGTTCAAGATAGATTCATGTGCTGATGAGCCTGGTAATACACAAATTCCAAATTCGGCACTGGTTGGTTCAGCTGAGCCAGAACAAACAGGCGTTACTGATAATGCGGCTCCTAGTAGTCATACAGCGATAGAACCTGTCAAACCTGCGTGCGATGCGGCTCCTAGTAGTCATACAGAGATAGAACCTGTTAAACCTGCGTGCGATATTGTCAAGATTATAAAGCCAGTAGGCTTTACACCTGCAGTAGCCAGCACCACACAGGATGTTTTGGTGTCTTTTGAGGCTTTAAGGTCTGATGGATCAGAAGTTGTGGTCGATAATACTCATCTCAAAACACATCATCCGATCCTGCTGATTGATTTCTATGAGCAGCATCTGCGCTACACTCCAAAACCAGTCTGA 1629 0.4383 MDDGREWESGLDKDGYKNEDEAEKSSVKNLEEEETDIQGEGNKNTNLGWLAVAAAVACIREEKQEDGVTLSGLRHSPVLNKAKVHKGKEVMMETTTLDAPNGAPAVDFSATEAGEGSGGHGNGGDEENGDDDLGVEERLPSLDDGFYEVEAIRRKRYRKGKLEYFVKWLGWGEAANTWEPPDNLVGVPEIIEAFENGLLKSTKHRKHKRKDVVHQTQIKKRVERSATPYSLRCLKTSSTSKSHSHVAANNHSAPASLSEQPGIPHIPDFPAFPQTVLFADEVENNDDGRNLQEDNHAYDNKIANPSEEVPRNNEEKEYDPKLSELKATTTNENEADKLKAATTNGNDADNLAIKFQEAKVPTGETSMSDQPMAVCTELNSKRKAVSTEPVQNGTGRSRGRPRKSISVKRFKIDSCADEPGNTQIPNSALVGSAEPEQTGVTDNAAPSSHTAIEPVKPACDAAPSSHTEIEPVKPACDIVKIIKPVGFTPAVASTTQDVLVSFEALRSDGSEVVVDNTHLKTHHPILLIDFYEQHLRYTPKPV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0264 542 MobiDBLite consensus disorder prediction 419 448 - -
Mal5g0264 542 Coils Coil 13 33 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 237 263 - -
Mal5g0264 542 ProSitePatterns Chromo domain signature. 164 184 IPR023779 -
Mal5g0264 542 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 98 540 IPR044251 GO:0006325|GO:0031507
Mal5g0264 542 Pfam Chromo (CHRromatin Organisation MOdifier) domain 147 195 IPR023780 -
Mal5g0264 542 SMART chromo_7 146 199 IPR000953 -
Mal5g0264 542 Gene3D - 141 213 - -
Mal5g0264 542 CDD CD_CSD 147 195 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 308 323 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 237 257 - -
Mal5g0264 542 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 98 540 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 98 138 - -
Mal5g0264 542 ProSiteProfiles Chromo and chromo shadow domain profile. 147 206 IPR000953 -
Mal5g0264 542 MobiDBLite consensus disorder prediction 1 46 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 285 334 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 380 450 - -
Mal5g0264 542 SMART ChS_2 467 540 IPR008251 GO:0005634
Mal5g0264 542 SUPERFAMILY Chromo domain-like 136 196 IPR016197 -
Mal5g0264 542 MobiDBLite consensus disorder prediction 380 399 - -
Mal5g0264 542 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0264 Mal-Chr5 4431009 4436912 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0264 - - aprc:113849713 359.377