Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0254 ATGGAAGAAACAGATTCAGTTGCTACACTGATGGATTCTACATCTTCGAAGATACAACAGCTGCAGAAGGCATTTGCTGAACTTGAAAGTTATCGAGCTGTTACTCTTAACATGAAATGGAAAGAACTAGAGGAACACTTTCACGGGCTTGAGAAGTCTTTGAAGAGGCGCTTTCATGAATTAGAAGATCATGAAAAAGTGTTTGAGAACAAAACAATGAAAGCTCGTGAAATGTTGAAGAGGCAGGAAGAAGCTGTTTTTGCCAAGGAGCAAGCCACATTGCAGAGGCTTCAAGAGAAAAGAGATGCTGCCACATTTGTCATTTTAAATGCTCGAGAAAAGCACAGGAAGGTTTCACAAAAAGATTTGGCCATTGTCTCTTATGGGGGTCAAGTTACATCAGACGTGGAGGAGAAACCGATGGATGCTGTTTCTAATGTGACGGAAGGTCTTGTAGAAGATGTGAAACTTTCTCCTGAAAATGGAAATGTGGAAGTGATCTCTTATCCAGAGTTGGTAAAACTTTGTAAAGAGATGGATGTTTCTGGACTTCACAAATTCATATCTGATAACCGTAAGAACCTTGCTGCGATAAGGGAAGAAATACCGCATGCATTAAAAGCTTCTCCTAATGCTGCATGTTTGGTGTTGGATTCTTTGGAAGGATTTTACTGCACGGAAGTGTCAACTCAGGATATTAAGAAGGATGCTAACTTATTAGGTCTTCGCCGGACCTGTATCATGTTGATGGAATGTCTGAGTGATTTCCTGACCAATTCAGGCGGTATTTCTAATTTAGTATCGAAAGATATCAAGGACAGGGCAAAGGCAGTTGCTGAGGAATGGAAACCTAAATTGGATGCTCTTGACATGGATGCTAGCAATGGGAATTCCTTGGAGGCTCATGCGTTTTTACAACTTCTAGCCAGTTTTGATATTGCGTCTGGTGTAATTGAGGTTTTGGTGAACAGTGGGAGGCAAATTGACGCTGTTAACTTGGCTTTCGCATTTGATCTGACAAAACAAAATTCTTGCTCACCTGTCAAAAGGGTTAACTCATCCCCCACTGCTCAGATTGAAGTTAGTGAACGGGAGCTAATCACTCATAAAGCAGTAATCAAGTGCATTGAAGAACACAAACTTGATGAGCGGTATCCTCTAGACCCTCTCATGAAACGAGTTGTTCAACTAGAGAAGGCGAAAGCTGACAAAAAGAGGGAAACTGAAGCGACAAAGCCTCAACCGAAGAGACCTCGTGCTAACGGTGTGGGATATGGTCCTCGTGTCACTAACATTCCTTCTGACAAAACTTCCTATACTAGAGTTGCTGACAGGTACCCGCAAACGCAATATGTGTACGACCGACCTTACATGTACCCCGCACCAACTGATAATCATTGTCGCCCTCTCCTCGGCACTCCACATTATAACTTCTCGCATAACCATGGCAACTACTATGGAAGTGGATATCAGTACCAAGCCACATATCTTCACTAG 1497 0.4242 MEETDSVATLMDSTSSKIQQLQKAFAELESYRAVTLNMKWKELEEHFHGLEKSLKRRFHELEDHEKVFENKTMKAREMLKRQEEAVFAKEQATLQRLQEKRDAATFVILNAREKHRKVSQKDLAIVSYGGQVTSDVEEKPMDAVSNVTEGLVEDVKLSPENGNVEVISYPELVKLCKEMDVSGLHKFISDNRKNLAAIREEIPHALKASPNAACLVLDSLEGFYCTEVSTQDIKKDANLLGLRRTCIMLMECLSDFLTNSGGISNLVSKDIKDRAKAVAEEWKPKLDALDMDASNGNSLEAHAFLQLLASFDIASGVIEVLVNSGRQIDAVNLAFAFDLTKQNSCSPVKRVNSSPTAQIEVSERELITHKAVIKCIEEHKLDERYPLDPLMKRVVQLEKAKADKKRETEATKPQPKRPRANGVGYGPRVTNIPSDKTSYTRVADRYPQTQYVYDRPYMYPAPTDNHCRPLLGTPHYNFSHNHGNYYGSGYQYQATYLH* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0254 498 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 3 315 - -
Mal5g0254 498 PANTHER FRIGIDA-LIKE PROTEIN 3 315 - -
Mal5g0254 498 Pfam Frigida-like protein 315 408 IPR012474 -
Mal5g0254 498 Pfam Frigida-like protein 166 315 IPR012474 -
Mal5g0254 498 MobiDBLite consensus disorder prediction 399 435 - -
Mal5g0254 498 PANTHER FRIGIDA-LIKE PROTEIN 314 498 - -
Mal5g0254 498 Coils Coil 80 100 - -
Mal5g0254 498 MobiDBLite consensus disorder prediction 399 414 - -
Mal5g0254 498 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 314 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0254 Mal-Chr5 4242140 4244898 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0254 - - gmx:100806993 784.637