Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0252 ATGGCGTTACAGTTTGTGAAGCAGAACTACTTACGAGGTTTACAAACCGAGAAAACCTTAACTTTCTTTTCTTTGTTACGAAACCTTAAACTCCCAGGAACAGTGAGATGGGTCAGTGGTCAAATACCAGTTAGAAGAGGTTCCTTTAGAAGCTATGCTACTGCAAAATCAGAAAAGATTATACCAATCAAGAAGAAAAAGCGGCTGGATGAGGTATGCCTTGAAAAATATGAGCAATATAGTAGATCCATCATCCAGTCATGGATTGTGCAAGGAAAAGTATTTGTGAATGGGAAGAGGATCTATAAAGCCGGTACACCTGTGTCTGACAAATCTGTTGTGGAGATAAAAGCTGAAGTTCCCAAATATGTATGTAGAGCTGGACATAAGTTGGAAGGTGCCATTGAACAGCTCGGTGTTGATGTTGCTGGTAAAGTAGCTCTTGATTCAGGCCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGTGCATCACATGTTTATGGGGTTGATGTAGGGTATGGACAGGTAGCAGACAAAATCCAAAGAGATGAACGTGTATCTATTATAGAGCGGACAAATTTAAGATATCTCAAAGAACTGCCACAAAATGTTGATTTGGTGACCCTAGACCTCTCATTCATCTCTATTCTAACGGTCATGCCTGCTGTGGTAAATGTTATGAAGGAAGATGCCGCATTAGTGACCTTGGTTAAACCACAATTTGAAGCTCGGAGATCTCAAGTAGGAAAGGGAGGAATAGTGAAAGATCCTGCTGTCCATCAAGAGGTTCTTGAGAGGATTACAAAAGGAGTAGAGAGTTTTGGTTTCTGCAGCAAAGGTTGGATTGAGTCTCCTCTCAAAGGTGCCGAGGGAAATACAGAATTCCTTGTTCACTTCACCAGAATCCATAACAAAGGTGCTGAAAGTCATGAAGAAATTAGAGAGGAAATTTAG 963 0.4091 MALQFVKQNYLRGLQTEKTLTFFSLLRNLKLPGTVRWVSGQIPVRRGSFRSYATAKSEKIIPIKKKKRLDEVCLEKYEQYSRSIIQSWIVQGKVFVNGKRIYKAGTPVSDKSVVEIKAEVPKYVCRAGHKLEGAIEQLGVDVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIQRDERVSIIERTNLRYLKELPQNVDLVTLDLSFISILTVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPAVHQEVLERITKGVESFGFCSKGWIESPLKGAEGNTEFLVHFTRIHNKGAESHEEIREEI* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0252 320 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 68 297 IPR004538 GO:0003723
Mal5g0252 320 CDD AdoMet_MTases 148 227 - -
Mal5g0252 320 Gene3D - 56 123 IPR036986 GO:0003723
Mal5g0252 320 Pfam S4 domain 68 111 IPR002942 GO:0003723
Mal5g0252 320 ProSiteProfiles S4 RNA-binding domain profile. 67 127 - -
Mal5g0252 320 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 63 308 - -
Mal5g0252 320 SMART s4_6 67 132 IPR002942 GO:0003723
Mal5g0252 320 Gene3D Vaccinia Virus protein VP39 126 320 IPR029063 -
Mal5g0252 320 CDD S4 68 123 - -
Mal5g0252 320 Pfam FtsJ-like methyltransferase 123 301 IPR002877 GO:0008168|GO:0032259
Mal5g0252 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 80 308 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0252 K06442 - gmx:100781303 485.723