LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal5g0251	ATGACCATTCAAGCCTTTCATGGTTCTTCTTCTTGTTACTTCCATTCCCAGCTTCACTCTTGTTCCACAAAACGTTTCCCTTCAAGGAAGACTCTGAAGCTGAACTGTAGTAGTACTTCAAATGGAGACAAAGATGATTATCTTCTGGATGCTCCTATTTCTGTTGGTGATGGTTTCTCTTTCAGTGGAGGAAAATATTCAGATGGGCCTAATCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTAAAGCCTATTCAATTCCTGGAACTGGTGAAAAGGCAAAAGATCCAATTTTTGGGCTAACAATGGGTACCAGTTCTCAAGCTACCGGCGATCGTTTCAGATGGTTTTGTGTCGAACGCGGAAGTGTTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCGGTACTCTCCAAGGACTATCACGCTGTAACATTTGATTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCCAAATATGGGTTTGACTACACCCTTGATGAATATGTGTCATCATTGGAGTCACTTATCGATGAACTAGCTGTTAACAAAGTTTCACTTGTTGTCCAAGGATATTTTTCACCAGTTGTAGTTAAGTATGCCAGCAATCACCAGGAGAAGATTAACAACTTAATACTCATTAATCCGCCTTTAACAGCCCAACATGCCAAACTTCCACCTACATTGTCCATATTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTGAGGGCAAGTGACAAAGCACTGACAAGCTGTGGACCCTACAAAATGAAAGAAGAAGATGCAATGGTCTATAGAAGACCCTATCTCATATCTGGCTCCTCAGGCTTTGCATTGAATGCAATCACCAGGACCATGAAGAAAGACCTCAAGAGGTATGTGGAGGATATGCAAACAATTCTAAAGGACAAAAGTTGGAACGTTCGAACCACCGTATGTTGGGGCCAGAGAGATCGCTGGTTGAGCTACGATGGAGTGGAAAATTTCTGCAAAGGTTCCAACCATAAGCTTATTGAAGTTCCAAAGGCTGGACATCATGCACAGGAAGATTGCGGCGAAGAACTTGGACAACTTATTTATGGAATAATAAGAAAAAAGAACTAA	1158	0.4119	MTIQAFHGSSSCYFHSQLHSCSTKRFPSRKTLKLNCSSTSNGDKDDYLLDAPISVGDGFSFSGGKYSDGPNPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLTMGTSSQATGDRFRWFCVERGSVDNPSVILIHGFPSQAYSYRKVLPVLSKDYHAVTFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELAVNKVSLVVQGYFSPVVVKYASNHQEKINNLILINPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLISGSSGFALNAITRTMKKDLKRYVEDMQTILKDKSWNVRTTVCWGQRDRWLSYDGVENFCKGSNHKLIEVPKAGHHAQEDCGEELGQLIYGIIRKKN*	386

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal5g0251	385	PRINTS	Alpha/beta hydrolase fold signature	328	342	IPR000073	-
	Mal5g0251	385	PRINTS	Alpha/beta hydrolase fold signature	215	228	IPR000073	-
	Mal5g0251	385	PRINTS	Alpha/beta hydrolase fold signature	153	168	IPR000073	-
	Mal5g0251	385	PANTHER	HYDROLASE-LIKE	38	383	-	-
	Mal5g0251	385	SUPERFAMILY	alpha/beta-Hydrolases	109	382	IPR029058	-
	Mal5g0251	385	Pfam	alpha/beta hydrolase fold	128	367	IPR000073	-
	Mal5g0251	385	PANTHER	EPOXIDE HYDROLASE	38	383	-	-
	Mal5g0251	385	Gene3D	alpha/beta hydrolase	104	379	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal5g0251	Mal-Chr5	4222463	4226589	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal5g0251	121	259	Acyl Lipid Metabolism Gene Families	AT3G05600	28.846	4.61e-10	57.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal5g0251	-		-	gmx:100809126	676.396