Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0220 ATGTCCACTCTACTTCAATCCTCTTTCATTTCTTCTTCTTCCTCCTCCTTCTCTCCTATCACTCCCAAACGAATCTCCCTCCGAAACGCCGCCGCATTCAGATGTAACAATGTAGTAGAATCTGTGGATTTGGAAAACGGAAAACCCTATCGTTCAACTCAATTTTCCGTCAACGGTGGTGGTACAAGTTCAATTCCGAGTTTCTTAGTGGCGCCAAACACTCGTATCCATGATCTCGTTAACAAAAATCGTCTTCGTATTTTCTCCGGCACCGCCAATCCCGCACTCGCTCAGGAAATTGCATGTTATATGGGCCTGGATCTGGGAAAGATTAAGATAAAACGTTTTGCCGATGGTGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCCACATGTCCTCCCGCGAATGAGAATCTTATGGAGCTTCTCGTAATGATTGATGCCTGCAGGAGAGCTTCAGCCAAAAATATTACTGCAGTCATTCCGTATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCAGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGGTAGTTGTCTCCCCAGATGTTGGCGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAATTATCTGATGCTCCTTTAGCTATTGTTGATAAAAGGCGTCATGGGCATAATGTTGCTGAGGTAATGAATTTGATAGGTGATGTAAAGGGAAAGGTAGCTGTTATGGTAGATGACATGATTGATACTGCTGGGACCATCGCCAAAGGTGCAGCTCTGTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACTACACATGCTGTTTTCAGCCCTCCTGCTATCGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCAGTGTCCGAGAAGAACTATTTCCCCCAATTAACCGTCTTATCAGTGGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCATGATGACTGCTCAGTGAGTAGCATATTTCTGTAA 1188 0.4411 MSTLLQSSFISSSSSSFSPITPKRISLRNAAAFRCNNVVESVDLENGKPYRSTQFSVNGGGTSSIPSFLVAPNTRIHDLVNKNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPVSEKNYFPQLTVLSVANLLGETIWRVHDDCSVSSIFL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0220 395 Gene3D - 228 371 IPR029057 -
Mal5g0220 395 SMART Pribosyltran_N_2 85 201 - -
Mal5g0220 395 Gene3D - 88 386 IPR029057 -
Mal5g0220 395 TIGRFAM ribP_PPkin: ribose-phosphate diphosphokinase 86 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mal5g0220 395 Pfam N-terminal domain of ribose phosphate pyrophosphokinase 85 201 IPR029099 -
Mal5g0220 395 CDD PRTases_typeI 244 356 IPR000836 -
Mal5g0220 395 PANTHER RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER 47 395 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mal5g0220 395 PANTHER RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 2, CHLOROPLASTIC 47 395 - -
Mal5g0220 395 Pfam Phosphoribosyl synthetase-associated domain 286 394 IPR005946 GO:0000287|GO:0004749|GO:0009165
Mal5g0220 395 SUPERFAMILY PRTase-like 150 386 IPR029057 -
Mal5g0220 395 ProSitePatterns Phosphoribosyl pyrophosphate synthase signature. 209 224 IPR000842 GO:0000287|GO:0004749|GO:0009156|GO:0044249
Mal5g0220 395 Hamap Putative ribose-phosphate pyrophosphokinase [prs]. 85 395 IPR037515 GO:0004749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0220 Mal-Chr5 3828744 3833191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0220 K00948 - gmx:100816430 647.506