Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0185 ATGGCGTCATCAGATGAAGAGGGTGAGATTGTTCCAGATTCTGTTGATAGTTATTGGTTTGAAAATGATAGGGCAGAATTTGTGTCATTCTCTAGTTTGACACTATTGTGGAGCGTTAACGATGTCTCGTGTGGCTCAGAAACCAAAGTGTTTTTACGTGGCACTACCGATAATGGTCTCCAGAAAATTCACAAACAGATTATAGGATGGAGATTTGAACTTTCCTGTGAGCAGCCTGAGATTTCAGTGCTTTTGAGGGATAAATACTGGATAACTCTTCTAAAACCAAGAAAATGCTTTGAAAGTACTATTAGGTCAGTCTTGGTGACAGTTTATTGGTTGCATTGTGTGAAATGGAAACCAGAGGAATCAAGAGTATCTATTTTGGTCAAAGTGTTGAAGGAATTTAGCTCATTTGATATTACACCTTCTGAGAATGATGTTCTGAATCACACGGCGTTGATTAGCGAGGCGATTAAAAGGGACACAAATTTAACAAAATCCAAGTATTTGCTTGATTTCATTGGAAAGACATGTTCAAATGAAGACTTCCGTGCGGATGTTCACACCACAAAGAAATTAAAACTGATAGTTGAGTCAGAGGAGGAGAATCTGGAGGAGGAGAATGACATAGTTGAGTCAGAGGAGGAGGATCCGAAGGAGAATGACATAGTTGAATCAGAGGAGGAGGATCCGGAGGAGGAGAATGACATAGTTGAATCAGAGGAGGAGGATCCGAAGGAGAATGACATAGGTGAATCAGAGGAGGAGGATCCGGAGGAGGAGAATGACATAGTTGAATCAGAGGAGAAGGATCCAGAGGAGGAGAATGACATAGTTGAATCAGAGGAAAAGGACCCGGAGGAGGAGAATGACATAGTTGAATCAGAGGAGGAGGATCCGGAGGAGGAGAATGACAAATCTGACGGAGAAGGCGAACTCAATGTAGATGAAGAGCAAAATTTCGGATACGATACTGTTTGTGCTATTTGTGATAACGGTGGTGAAATACTTCCTTGTGAAGGAAGGTGTTTGAGATCCTTCCATGCAACCATTGAGGATGGTAGAGATTCATTGTGTGCATCTCTTGGTTACACTAGAACTGAAGTTAATGCTTTTCCAAACTTCTATTGTGAAAATTGTAAACATAAGAAGCATCAATGCTTTGCATGTGGCAAATTGGGTTCATCTGATGAATCATCTAATCCAGAGGTATTTCCTTGTGTTACTGCAAATTGTGGTCACTATTACCATCCTGAATGTGTTGCAAGACTACTCTACCCTGGCACGGACATCGAACAAAAGGAAATGAGAAAGAGCATTACCATAAAAAAAACATTTGTCTGTCCTCTTCATATATGTTCTTTATGCAGAAAAGGGGAAAATAGAAATGTCCATGAACTACAATTTGCGATGTGCAGACGCTGCCCCAAAGCTTACCACAGGAAATGCTTGCCCAAGGAAATTTCCTTCACATTTGATTATTATATGGGCATTGAGCTGAGGGCTTGGGACAATCTCCTTGACAAACGAATTTTGATGTATTGCATGTTGGATGAAGCTAGATACCAACATAAAAAATCTGTTGGTAGAATTGAAGAAACAAGCTTGAAGAAGCCTCCGGTAAAGAAAGTCAAAACTTCACTCGAGGATAGAAAAGCAGATATGGAAAAACGAATTTTGGCTTTAATGGAAGAAGCCACATCTAAATTGAACATGGAAAAATTTAAAAAGGACCATCAAGTCGCCAATACAAGTTCGAGTCTCACAGAAACTGTATTTCGTAAGACTCTTACTCAAGGAAAAGTTGAGGGTTCTGTTAAGGCTGTTCAAATAGCTTTACAGAAGTTGGATGAAGGATGTAGTATTGAGGAAGCAAAAGCTATTTGTGAGCCAGAAATCGTTCGTCAGCTTTTTACTTGGCAGAAGCAGCTCAAAGTCTATCTTGCACCTTTTCTTCATGGCAGGCGATATACTTCATTTGGTCGCCATTTCACTAAAATAGATAAGTTAAAGGAGATTGTTGATAGGCTTCATTGGTATGTGCAAAGTGGTGACACGGTTTTGGACTTCTGCTGTGGTGCAAATGACTTCAGCTGTCTAATGAAATCAAAGCTTGAGCAGACTGGGAAGTTATGTTCATTTAAGAACTATGATTTATTCCAAGCTAAGAATGATTTCAACTTCGAGAAGAGAGATTGGATGAGTGTCCAGGCTGAGGAATTACCCCATGGTTCTCGGCTTATCATAGGGCTCAATCCTCCTTTTGGGGTCAAGGGTTCTCTTGCTAACAAATTTATCAACAAGGCACTGTCATTTAAGCCAAAACTCCTTATACTTATTGTGCCAAAAGTAACAAAAAGACTTGACAAAAAGAAAGGTGGATATGATTTAATTTGGGAGGATGAGGAAATATGTTCAGGAAAGTCATTTTATCTACCTGGTTCTGTCGATACTCGAAATAAGCAATTGGAAGACTGGAACCTGAAGCCGCCGCCTCTTTACCTTTGGAGTCGCCCTGACTGGACTGCTTGGCACATGCAAATTGCTCAAATGCATCGCCACATCAAATATAATGTCTGTAATAATAATAATAAAGGAAAATCTTTCAAAAAAAATAATAATAAAGGAAAAGAAGTGAGAAATTATCTTATGGAGGAGAATCATGATTGTTATCAGAATTACCCTGGGTTACATGCACCTGGTAATTTTTTAAGCATATTTGATGGTGTTCCAGATGATAATGGTGACATTACACTAGGGCATGGTGCAGCTAGCTTTCCTTGA 2787 0.3961 MASSDEEGEIVPDSVDSYWFENDRAEFVSFSSLTLLWSVNDVSCGSETKVFLRGTTDNGLQKIHKQIIGWRFELSCEQPEISVLLRDKYWITLLKPRKCFESTIRSVLVTVYWLHCVKWKPEESRVSILVKVLKEFSSFDITPSENDVLNHTALISEAIKRDTNLTKSKYLLDFIGKTCSNEDFRADVHTTKKLKLIVESEEENLEEENDIVESEEEDPKENDIVESEEEDPEEENDIVESEEEDPKENDIGESEEEDPEEENDIVESEEKDPEEENDIVESEEKDPEEENDIVESEEEDPEEENDKSDGEGELNVDEEQNFGYDTVCAICDNGGEILPCEGRCLRSFHATIEDGRDSLCASLGYTRTEVNAFPNFYCENCKHKKHQCFACGKLGSSDESSNPEVFPCVTANCGHYYHPECVARLLYPGTDIEQKEMRKSITIKKTFVCPLHICSLCRKGENRNVHELQFAMCRRCPKAYHRKCLPKEISFTFDYYMGIELRAWDNLLDKRILMYCMLDEARYQHKKSVGRIEETSLKKPPVKKVKTSLEDRKADMEKRILALMEEATSKLNMEKFKKDHQVANTSSSLTETVFRKTLTQGKVEGSVKAVQIALQKLDEGCSIEEAKAICEPEIVRQLFTWQKQLKVYLAPFLHGRRYTSFGRHFTKIDKLKEIVDRLHWYVQSGDTVLDFCCGANDFSCLMKSKLEQTGKLCSFKNYDLFQAKNDFNFEKRDWMSVQAEELPHGSRLIIGLNPPFGVKGSLANKFINKALSFKPKLLILIVPKVTKRLDKKKGGYDLIWEDEEICSGKSFYLPGSVDTRNKQLEDWNLKPPPLYLWSRPDWTAWHMQIAQMHRHIKYNVCNNNNKGKSFKKNNNKGKEVRNYLMEENHDCYQNYPGLHAPGNFLSIFDGVPDDNGDITLGHGAASFP* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0185 928 CDD PHD2_NSD 387 452 - -
Mal5g0185 928 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 525 907 - -
Mal5g0185 928 PANTHER EDM2-LIKE PROTEIN1 1 517 - -
Mal5g0185 928 Coils Coil 195 218 - -
Mal5g0185 928 SMART PHD_3 454 502 IPR001965 -
Mal5g0185 928 SMART PHD_3 387 453 IPR001965 -
Mal5g0185 928 SMART PHD_3 327 382 IPR001965 -
Mal5g0185 928 Coils Coil 546 566 - -
Mal5g0185 928 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 384 475 IPR013083 -
Mal5g0185 928 PANTHER EDM2-LIKE PROTEIN1 525 907 - -
Mal5g0185 928 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 517 - -
Mal5g0185 928 MobiDBLite consensus disorder prediction 201 314 - -
Mal5g0185 928 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 659 764 IPR029063 -
Mal5g0185 928 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 324 383 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0185 Mal-Chr5 3294205 3306449 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0185 - - cam:101512524 695.656