Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0153 ATGTACGGTGGTGATGAAGTTTCAGCTATAGTCATTGATTTGGGTTCACATACTTGTAAAGCTGGTTATGCTGGTGAAGATGCTCCCAAAGCTGTCTTTCCTTCTGTTGTTGGAGCGATTGATCAAATGGATGTTGATGAATCAGATGATGCTGAAAAGAACTCTGGCTCTGGTGAATCAAAGAACAATATTAGAAATGCTGATGGTGATAAAGCCAAAGGAAAGAGAAAGTTGTATGTAGGATCTCAGTCCTTGGGCTACCGTAGAGACTTTATGGAGGTGGTGTCTCCATTAAAGGATGGAACTGTTGCTGACTGGGATATTGTTGACAGCATTTGGGATCATGCCTTCAGTAGGGAGTGCCTATTGATTGATCCTAAAGAGCATCCCATGCTCCTTGCAGAGCCTTCTTCTAATGCTCAACAACAGAGAGAAAGGGCAGCAGAGCTTATGTTTGAGAAGTACAAAGCACCTGCATTATTTTTGGCAAAAAATGCTGTTTTGACTTCTTTTGCATCAGGGCGTGCCACATCATTAGTTGTTGATTGTGGTGGAGGATCAACTACAGTTGCACCGGTACACGATGGCTATGTTCTTCAGAAGGCTGTGGCAACGTCTCCAATCGGAGGAGAATTTCTTACAGATTGCTTGATGAAAAGCTTGGAAAGCAAGGGTATCGTGATGAAACCTCGGTATTCCTTTAGGAGAAAAGAAATACGCCCTGGAGAGTTTCAGACTGTAGATTTGGATTTTCCTAATACATCTGAAAGCTACAAGCTCTACTCCCAGAGGGTGATTGCTAGTGATATCAAGGAATGTGTGTGCCGTGCTCCAGATACTCCATATGATGAGAGTGCATATTCAAACATCCCAACGACCTCATATGAGCTTCCTGATGGCCAGACAATTGAAATTGGAGCTGACAGATTTAAGATTCCAGATGTTCTTTTCAATCCATCCTTGGCTCAGTCAATTCCAGGCATGGAGAGCTTTGCAGAAATTGCTCCATCAGTTCGTGGCCTGCCTCAAATGGTTATCGAAAGCATTAATAAGTGTGATGTAGACATTCGAAGAGAATTATTTAGTAGCATACTGCTTGCTGGTGGCACAGCTTCAATGCAACAACTGAAGGAACGCCTTGAGAAAGACTTGCTAGAGGAATCCCCTCAGGCTGCTAGAGTAAAGGTATTGGCCAGTGGAAATGCTACTGAAAGGAGGTTTAGTGTCTGGATTGGAGGCAGTATATTGGCTTCTCTTGGTTCCTTCCAACAAATGTGGTTCTCCAAATCCGAGTATGAAGAGCATGGAGCTTCATATATCCAAAGGAAGTGTCCTTGA 1338 0.4327 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDDAEKNSGSGESKNNIRNADGDKAKGKRKLYVGSQSLGYRRDFMEVVSPLKDGTVADWDIVDSIWDHAFSRECLLIDPKEHPMLLAEPSSNAQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIVMKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPTTSYELPDGQTIEIGADRFKIPDVLFNPSLAQSIPGMESFAEIAPSVRGLPQMVIESINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRKCP* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0153 445 Pfam Actin 4 444 IPR004000 -
Mal5g0153 445 SUPERFAMILY Actin-like ATPase domain 174 444 IPR043129 -
Mal5g0153 445 PANTHER ACTIN 2 444 IPR004000 -
Mal5g0153 445 Gene3D - 3 181 - -
Mal5g0153 445 Gene3D Actin; Chain A, domain 4 210 323 - -
Mal5g0153 445 MobiDBLite consensus disorder prediction 46 70 - -
Mal5g0153 445 PANTHER - 2 444 - -
Mal5g0153 445 Gene3D - 182 384 - -
Mal5g0153 445 CDD NBD_sugar-kinase_HSP70_actin 10 204 - -
Mal5g0153 445 Gene3D - 390 445 - -
Mal5g0153 445 SUPERFAMILY Actin-like ATPase domain 5 181 IPR043129 -
Mal5g0153 445 SMART actin_3 7 445 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0153 Mal-Chr5 2864668 2879081 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0153 1 444 Miscellaneous Gene Families AT3G53750 37.136 2.20e-93 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0153 K11340 - gmx:100785066 818.15