Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0138 ATGGAAGCATCAACAGAAACAAACAAAGCCGCCGAAGAGGAGCAGGTGGTGACTCCGTGGGAGGTTGACGGCAAAGATGGAGGCAAAATCGATTACGACAAACTCATCGACCGTTTCGGTTGCCAAAGAATCGATCAATCTCTCATTCAACGCGTCGAGAAACTCACTTCTCACCCCGCTCATGTCTTCCTCCGTCGAAGCGTCTTCTTCGCTCACCGTGATTTTGCGGATGTATTGGATGCATATGAAAAGGGAGAGAAGTTTTATTTGTATACAGGACGTGGACCTTCTTCTGAAGCTTTGCATTTGGGTCATTTGATTCCATTCATGTTCACTAAGTATTTGCAAGAGGCATTTAAGGTTCCTCTGGTTATACAGCTCACTGATGATGAGAAGTTCTTGTGGAAAAATCTTACTGTAGAGGAGTGCCAAAGACTTGCGAGGGAGAATGCAAAGGATATCATTGCTTGTGGTTTTGACGTATCAAAGACATTCATCTTCTCTGATTTCAATTATGTTGGCGGTGCCTTCTACAGGAACATGGTACAGGTTGCAAAGCGTGTGACTTATAACCAGGCTGTTGGCATTTTTGGGTTCACGGGGGAAGATCATATTGGAAAAGTTAGTTTTCCACCTGTGCAGGCAGTTCCATCATTTCCTAGTTCATTTCCTCATCTATTTAAAGGCAAAGAGAATCTCCGTTGCTTAATTCCTTGTGCAATTGACCAGGATCCTTATTTTAGAATGACACGAGATGTTGCTCCTCGAATTGGATACCACAAGCCTGCTTTGATTGAATCATTATTCTTCCCCGCATTACAGGGAGAAACAGGAAAAATGTCTGCCAGTGATCCCAATTCTGCAATATATGTGACTGATTCTGCAAAAGATATAAAGAATAAGATAAACAGATATGCATTCTCCGGTGGGCAAGATTCTATAGAGAAACATAGACAATTAGGGGCAAATCTCGAGGTAGATATACCTATCAAATACCTATCTTTTTTCCTGGACGATGATGCTGAACTTGAACACATAAAGATGGAGTATGGAGCAGGACGCATGCTCACTGGTGAGGTGAAGCAGCGCCTAATTCAAGTTTTGACTGAACTAGTGGAGAGACATCGGACAGCGCGAGCTAATGTGACTGAAGAGATGGTGGATGCATTTATGGCTGTCAGGCCACTTCCCCACATGTTTGATTGA 1206 0.432 MEASTETNKAAEEEQVVTPWEVDGKDGGKIDYDKLIDRFGCQRIDQSLIQRVEKLTSHPAHVFLRRSVFFAHRDFADVLDAYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQEAFKVPLVIQLTDDEKFLWKNLTVEECQRLARENAKDIIACGFDVSKTFIFSDFNYVGGAFYRNMVQVAKRVTYNQAVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHLFKGKENLRCLIPCAIDQDPYFRMTRDVAPRIGYHKPALIESLFFPALQGETGKMSASDPNSAIYVTDSAKDIKNKINRYAFSGGQDSIEKHRQLGANLEVDIPIKYLSFFLDDDAELEHIKMEYGAGRMLTGEVKQRLIQVLTELVERHRTARANVTEEMVDAFMAVRPLPHMFD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0138 401 Gene3D HUPs 7 282 IPR014729 -
Mal5g0138 401 TIGRFAM trpS: tryptophan--tRNA ligase 87 392 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 CDD TrpRS_core 89 371 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 Gene3D - 283 400 - -
Mal5g0138 401 PANTHER BNAA01G33520D PROTEIN 11 401 - -
Mal5g0138 401 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 96 106 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mal5g0138 401 Pfam tRNA synthetases class I (W and Y) 85 176 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mal5g0138 401 Pfam tRNA synthetases class I (W and Y) 241 371 IPR002305 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mal5g0138 401 PRINTS Tryptophanyl-tRNA synthetase signature 101 117 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 PRINTS Tryptophanyl-tRNA synthetase signature 153 172 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 PRINTS Tryptophanyl-tRNA synthetase signature 279 289 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 PRINTS Tryptophanyl-tRNA synthetase signature 235 256 IPR002306 GO:0000166|GO:0004830|GO:0005524|GO:0006436
Mal5g0138 401 PANTHER TRYPTOPHANYL-TRNA SYNTHETASE 11 401 - -
Mal5g0138 401 SUPERFAMILY Nucleotidylyl transferase 14 394 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0138 K01867 - gmx:100787194 711.835