Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0120 ATGGCTGTTAATTTCCTTTTGTTTGTGTTCGTTTTTGCTATTCAGTTTATTGCTGGATTCAACAAAGAGCTACCACCTCCAACCTATGGAAATGTAATCACCATTCTCAGTATTGATGGTGGTGGTATTAGAGGGATTATTCCAGCAATAATTCTTGACCACTTGGAAAAGGCTCTTCAGACGAAGGATAAAGAAGCATCACTAGCAAATTATTTTGATGTAATAGCTGGGACTAGTACTGGAGGACTCGTGACTGCTTTGCTCACTACTCCTCACCCAAATGACCCTACTCGTCCTCTACTTACTCCTGCAGAAGTAATCAACTTCTACAACGATTATGGTCCTTCAATATTCAATGAAACTAGTGGTTGGGATGCTACTTACCCAGGTCCAAAGTATGACGGCAAGTTCTTACATAATATAGCACGTGAATTATTGAAAGATACAAAACTGCATCAAACATTAACCAATGTAGTAATCCCAACATTTGACATCAAGAAATTTCATCCAGTTATATTCTCAAACTTTAAGCTGGATGAAGTTTCCGGTCTAGATGCAAAATTGTCAGATATATGTATTGGAACTTCAGCTGCACCAACTTATCTACCACCATATTACTTTGAAAATGATGGTGCTGAATTCAATTTGGTTGATGGAGGTGTTGCTGCATGTAATCCGACATTGGCTGCTGTGAGTGAAGCGATAAAACAACAGAAGGGGGAGCCTACCAAAATATTGTTGTTATCTATAGGATGTGGAGCTAAAAAGGTTACAGGGTTTGATGCTGAAACTGCAATTAATTTCTCAGCAGCATTTTGGGCAACATCTGGTCTTGCAGTTGGTAGTTATGATAATGCTGCTAAAGACATGACTGAATATTACCTTGCCAAATTGTTCCCAGACCTCCAATCTTCTCACAACTACCTCAGAATTCAGGAATATAACTTGGATCCATCGATGGATTCCATGGATAATGCTACACAAGCAAACTTGGAAAATCTTGCAAAGGTAGGAGAGAGCCTTTTGAGCCAACCAGTATTGAAAATGAATGTAGATACCAATGTGGCAGAGGAAAATACAAAGCAAGGTACAAATGCTGAGGCTCTTGAAAAGTTGGCAGAGACTTTATACAAAGAGAAGCAGCTTCGTCTGAAAAAGAAATTGATGATGGAAAAATTGGGACGACCACTTCTTGAAACTGTCACATTCCCTTTTGCTACTACAAGTTAG 1230 0.3902 MAVNFLLFVFVFAIQFIAGFNKELPPPTYGNVITILSIDGGGIRGIIPAIILDHLEKALQTKDKEASLANYFDVIAGTSTGGLVTALLTTPHPNDPTRPLLTPAEVINFYNDYGPSIFNETSGWDATYPGPKYDGKFLHNIARELLKDTKLHQTLTNVVIPTFDIKKFHPVIFSNFKLDEVSGLDAKLSDICIGTSAAPTYLPPYYFENDGAEFNLVDGGVAACNPTLAAVSEAIKQQKGEPTKILLLSIGCGAKKVTGFDAETAINFSAAFWATSGLAVGSYDNAAKDMTEYYLAKLFPDLQSSHNYLRIQEYNLDPSMDSMDNATQANLENLAKVGESLLSQPVLKMNVDTNVAEENTKQGTNAEALEKLAETLYKEKQLRLKKKLMMEKLGRPLLETVTFPFATTS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0120 409 Pfam Patatin-like phospholipase 36 230 IPR002641 GO:0006629
Mal5g0120 409 SUPERFAMILY FabD/lysophospholipase-like 32 353 IPR016035 -
Mal5g0120 409 PANTHER XYLOSE ISOMERASE 1 394 - -
Mal5g0120 409 PANTHER PATATIN 1 394 - -
Mal5g0120 409 Gene3D Cytosolic phospholipase A2 catalytic domain 26 389 - -
Mal5g0120 409 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 231 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0120 Mal-Chr5 2382370 2387690 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0120 24 383 Miscellaneous Gene Families AT2G26560 46.134 2.46e-100 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0120 - - gmx:100802114 540.806