Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0117 ATGGCTGGTTTTCTTTTATTTGTGTTTGTTTTTGCTAGTCAGGTGATTGGTGGATTCAATACAAAACTACCACCTCCTTCCTATGGAAATACAATAACCATTCTCAGCATTGATGGAGGTGGTATTAAGGGAATTCTTCCTACGAATGTGTCAAAAGATGAAAATGCAACTTTGGCTGGTTATTTTGATGTGATAACGGGGACTAGCACCGGAGGAATCATTGCTACTATGCTCGCTGCTCCTAATCCAAATGATACTTCTCGTCCTGCATTTACTACTCCAGAAATCTTAGAATTCTACCTAAAATACGGTCCTTCTATATTCAATCAAACTTCTATCATTGTACACTTATATAATTTATTTAATACAAGTTACTCCCTCCGTCTCACAATAAGTGTCTTGTTTTCAATTTTTTCTTGTCTCAAATTAATTAAGGAAGTTTCCGGCATAGGTGCAAAATTAGCAGATATATGCATTGGGACTTCAGCTGCACCAAGTCAACTACCAACCTATTTGTTTTTTAATGGTTTTAACGCATTCAATTTAATTGATGGTTTTGTCACTGCAGCTAGTCCGGCATTGATTGCAGTGAGTGAAGTGATACAACAATTGAATGAGAAGAATTCAGATTTCATTCCTGTGAAGGCAAACGAGCCAACCAAAATCGTGTTGTTGTCAATAGGAACAGGAAGAAATGGGGAAACTCAAGGAGTTGGTGCTATTGCTGCAAGATTCATTTCAGCTAATGAGTGGATACATGTTATAGCTGGAAGTCTTGCTATGTCTGCTGGACACATGAATGAATATCACCTTAAATCAGTGTTTCCTGATCTCCCAACTTCAGACAATTACCACCTTCGAATTGAGGAGTATAACTTGGATCCGTCCATGGGAGCTGATAATGTTACCAAAGAAAGTATGGATAATCTTGTAAAGGCAGGAGAGGACTTACTGAAACAAACTGTTAAGGTCATAGATATAAATACCTTTCTCCCACGCGAAAAACCAAGTGAGGGTACAAATGCTCAAGCTCTTGAAAGGTTGGCTGAAACTCTATACAATGAAAAGCAGCTGCGTTTGAAAACGAAATCAATGGAAAAAACAGGACGCCCATTTACTGAAGCTATTACATCCCCTTATCTTATGTCTGAAATGAAATAA 1161 0.379 MAGFLLFVFVFASQVIGGFNTKLPPPSYGNTITILSIDGGGIKGILPTNVSKDENATLAGYFDVITGTSTGGIIATMLAAPNPNDTSRPAFTTPEILEFYLKYGPSIFNQTSIIVHLYNLFNTSYSLRLTISVLFSIFSCLKLIKEVSGIGAKLADICIGTSAAPSQLPTYLFFNGFNAFNLIDGFVTAASPALIAVSEVIQQLNEKNSDFIPVKANEPTKIVLLSIGTGRNGETQGVGAIAARFISANEWIHVIAGSLAMSAGHMNEYHLKSVFPDLPTSDNYHLRIEEYNLDPSMGADNVTKESMDNLVKAGEDLLKQTVKVIDINTFLPREKPSEGTNAQALERLAETLYNEKQLRLKTKSMEKTGRPFTEAITSPYLMSEMK* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0117 386 SUPERFAMILY FabD/lysophospholipase-like 31 331 IPR016035 -
Mal5g0117 386 PANTHER XYLOSE ISOMERASE 2 119 - -
Mal5g0117 386 PANTHER XYLOSE ISOMERASE 137 370 - -
Mal5g0117 386 PANTHER PATATIN 2 119 - -
Mal5g0117 386 PANTHER PATATIN 137 370 - -
Mal5g0117 386 Pfam Patatin-like phospholipase 35 91 IPR002641 GO:0006629
Mal5g0117 386 Gene3D Cytosolic phospholipase A2 catalytic domain 123 365 - -
Mal5g0117 386 Gene3D Cytosolic phospholipase A2 catalytic domain 32 122 - -
Mal5g0117 386 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 35 197 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0117 Mal-Chr5 2316359 2321841 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal5g0117 23 359 Miscellaneous Gene Families AT2G26560 35.459 1.51e-54 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0117 - - cam:101513147 427.943