Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal5g0114 | ATGGCTTCACTCTCTTCAACACTAACACCAACTTCAACTTCTCTTTCTTTCTTCTCCTCTTCAATCTTCATCTCAAATCCAATTTCCAAATTCAAATTCACTCCAAATTCAAACTCAAATTCACATTCAAATTCACTTTCCATTTCTTGCAAACTCGCCACCCTCCCTCTCCTCTCCTTCTCCGGCGACAAAATCGGCGAAGCCACTCTCGACGTCAAATCCGCCCCTCCCTCCACCTCACGCGCCGTCGTCCACCGCGCCATTATCCACGACCTCCAAAACAAACGCCGCGGCACCGCTTCAACCCTAACCCGCGCCGAAGTTAGCGGCGGTGGTAGAAAACCCTACCGACAAAAGAAAACCGGTAGAGCACGTCAGGGTTCGAATCGTACACCGCTCCGACCCGGTGGTGGTGTGATTTTCGGTCCGAAACCTAGGGATTGGAGTATAAAGATTAATAAGAAGGAGAAACGGCTTGCGATTTCGACTGCGGTGGCGAGTGCGGCGGTGAATACGGTTGTGGTGGAGGAATTTGGAGATGCGTTTGAGGGGAATGCGAAGACGAAGGAGTTTATTGCGGCGATGAAACGGTGGGGATTGGATCCGACGGAGAAAGTTACGTTTTTTATGATGGAGGTGAAGGAGAAAGTGTTGCTTGCGAGTAGGAATATTGGGACTTTGAAGATTTTGACGCCGAGGACGTTGAATTTGTATGATGTTTTGAATGCTGATAAGATTGTTCTTACTCCTGATGCTGTGGATTATTTGAATGGTAGGTATGGGGATAGTTACCAAGATGATGATGAAGAAGAAGAAGAAGAAGTAGTAGAGGATGGCGAAAAAGGACCAGACACAGAAGAAAGTGCCGATGTGGTGAATTGA | 882 | 0.4762 | MASLSSTLTPTSTSLSFFSSSIFISNPISKFKFTPNSNSNSHSNSLSISCKLATLPLLSFSGDKIGEATLDVKSAPPSTSRAVVHRAIIHDLQNKRRGTASTLTRAEVSGGGRKPYRQKKTGRARQGSNRTPLRPGGGVIFGPKPRDWSIKINKKEKRLAISTAVASAAVNTVVVEEFGDAFEGNAKTKEFIAAMKRWGLDPTEKVTFFMMEVKEKVLLASRNIGTLKILTPRTLNLYDVLNADKIVLTPDAVDYLNGRYGDSYQDDDEEEEEEVVEDGEKGPDTEESADVVN* | 294 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal5g0114 | 293 | PANTHER | 39S RIBOSOMAL PROTEIN L4, MITOCHONDRIAL | 9 | 272 | - | - | |
| Mal5g0114 | 293 | MobiDBLite | consensus disorder prediction | 94 | 138 | - | - | |
| Mal5g0114 | 293 | Hamap | 50S ribosomal protein L4 [rplD]. | 60 | 261 | IPR013005 | - | |
| Mal5g0114 | 293 | TIGRFAM | rplD_bact: 50S ribosomal protein uL4 | 80 | 257 | IPR013005 | - | |
| Mal5g0114 | 293 | MobiDBLite | consensus disorder prediction | 264 | 284 | - | - | |
| Mal5g0114 | 293 | PANTHER | 50S RIBOSOMAL PROTEIN L4 | 9 | 272 | IPR013005 | - | |
| Mal5g0114 | 293 | MobiDBLite | consensus disorder prediction | 259 | 293 | - | - | |
| Mal5g0114 | 293 | Pfam | Ribosomal protein L4/L1 family | 80 | 258 | IPR002136 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal5g0114 | 293 | Gene3D | - | 38 | 274 | IPR023574 | GO:0003735|GO:0005840|GO:0006412 | |
| Mal5g0114 | 293 | SUPERFAMILY | Ribosomal protein L4 | 54 | 261 | IPR023574 | GO:0003735|GO:0005840|GO:0006412 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mal5g0114 | K02926 | - | fve:101296268 | 345.51 |