Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0108 ATGGATTGCGAAGAAGCTGAAGTAGCTGAAGAAGTTGAAGCTATGAAAGCTGTTTATGAAACCGATTGTGTCATTCTCCGTTCAATCCCTCCTTACTTCCATTTATCCCTCAAACCCAGAACCGCTGATGTTTCCTATGATCAGTTTGTAGAAATTGTTCTTGAGGTAAAAGCAACACCACAGTATCCAAAAGAACCTCCTTCTGTTGCTCTTGTGGATTGCAAGGGTTTGGATCAGCAGAGACAAAAGCATTTATTGAACCATATAGAAAGTAAAGCTAATGAGCTCTCCCCTGGCTTAATGCTTGTAGCTCTTTGTGAGGAAGCGGTAGAGAAACTCTCAGCTATGAATCATCCTGATGGTGATTGTCCACTGTGTTTATTCCCTTTGGTCACAGAAGATCACCAAAGTGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCATAGTGAATGTATCATTAGATGGTGGAATTGGATTCAGAGTTCTAAACAAACAAGCTCTGCCAATTCAGATAATGCAACTGCTCATCGTAATCGGGATAATAATCATGAAAAAATGGAAGAGGGTGTTGGAAACTGCCCTGTCTGTCGCAAACCTTTTCACGCCAAAGATTTGGACCATGTGCTTGACCTAGTTGGCTCACATTCTACCAGAGTGAGTTTGAATAATGACGAAGTCGACAATGATGAAAAAATCCTTCAATCCGAGCATGAGATCATCAGAAAACAGAGGTTTGAAGCCATCTTAAGTTTACAGAAGGAGAACAATGGTTTGATTGAACCCAAAAAAGATATTGTAATATTGCCTGGTATGTATCTTCAACAACCGGTTGCAGTGCCCGACTCCACGTCGTCAACCAAGGAACCTGACGAGATTGAACAACAGGAAAGAGATCCACCTGCAGTTGGGTCGGGAAGACATGTCAGTGGGACCTCAAATGGCCCTAGTTCAAGTGGTAACAGGAATTTCGGGGCAAGAAGGAATAGACCAAGAAATGATCATCACTCTAGTTCAACTGCAAGACATCCAAGAAAACCGGTCCAACAACAGTGGGTTAGAAGAGATAATCCTAGCAATAAGCAATAG 1101 0.416 MDCEEAEVAEEVEAMKAVYETDCVILRSIPPYFHLSLKPRTADVSYDQFVEIVLEVKATPQYPKEPPSVALVDCKGLDQQRQKHLLNHIESKANELSPGLMLVALCEEAVEKLSAMNHPDGDCPLCLFPLVTEDHQSETLPFMKLMSCFHCFHSECIIRWWNWIQSSKQTSSANSDNATAHRNRDNNHEKMEEGVGNCPVCRKPFHAKDLDHVLDLVGSHSTRVSLNNDEVDNDEKILQSEHEIIRKQRFEAILSLQKENNGLIEPKKDIVILPGMYLQQPVAVPDSTSSTKEPDEIEQQERDPPAVGSGRHVSGTSNGPSSSGNRNFGARRNRPRNDHHSSSTARHPRKPVQQQWVRRDNPSNKQ* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0108 366 MobiDBLite consensus disorder prediction 171 191 - -
Mal5g0108 366 Gene3D Ubiquitin Conjugating Enzyme 1 118 IPR016135 -
Mal5g0108 366 PANTHER RING FINGER PROTEIN 25 4 354 IPR039133 GO:0061630
Mal5g0108 366 SMART RWD2001b 10 116 IPR006575 GO:0005515
Mal5g0108 366 MobiDBLite consensus disorder prediction 283 366 - -
Mal5g0108 366 MobiDBLite consensus disorder prediction 311 330 - -
Mal5g0108 366 MobiDBLite consensus disorder prediction 331 345 - -
Mal5g0108 366 SUPERFAMILY RING/U-box 115 208 - -
Mal5g0108 366 ProSiteProfiles RWD domain profile. 10 116 IPR006575 GO:0005515
Mal5g0108 366 SUPERFAMILY UBC-like 6 113 IPR016135 -
Mal5g0108 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 216 IPR013083 -
Mal5g0108 366 ProSiteProfiles Zinc finger RING-type profile. 123 202 IPR001841 -
Mal5g0108 366 SMART ring_2 123 201 IPR001841 -
Mal5g0108 366 Pfam RWD domain 7 112 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0108 K10640 - gmx:100791789 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0108 5 2180728 2185696 Mal5g0108 5 2180728 2185696 ECH