Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0034 ATGGAAATGTTTGCTTTGGAAATTTTGGACCATACGGTCCTTCAAAAAATTGTTCTTGTTTTAATTTGTACTTTTTTGTTTTGGAAGATCATTAGATACATGAGTGGTCTTCTCAAAGTTGAGAAAGAACCGGTCATAGTATTGGTCACTGGTGCTGCAGGACAAATTGGCTATGCACTTGTTCCAATGATAGCAAGAGGGATGATGCTAGGCCCAAATCAACCTGTAATTTTGCATATGCTTGATATTGAACCAGCATTAGAGGCACTTAAAGGGGTGAAGATGGAACTAATTGATGCTGCTTTCCCACTTCTTAGAGGTGTTGTTGCTACTACGGATGTTGTTGAAGCTTGTAAGGATGTAAACATTGCTGTTATGGTTGGTGGATTCCCACGGAAGGAAGGAATGGAAAGAAAAGATGTAATGTCTAAGAATGTTTCAATTTACAAGGCTCAAGCTTCAGCTTTGGAGGAGCATGCTGCTGCAGATTGTAAAGTTCTAGTAATTGCCAATCCAGCAAACACAAATGCTCTAATACTTAAAGAATTTGCTCCATCAATCCCTGAGAAAAACATCACATGTCTAACTAGACTTGATCATAATAGAGCATTAGGCCAAATTTCTGAGAAGTTAAATGTTCATGTTAGTGATGTGAAAAATGTGATCATTTGGGGAAATCACTCCTCAACTCAATATCCAGACGTCAACCACGCAACCGTGGCAACAAGTAATGGCCAGAAGAAGCCTGTCAGAGAATTAGTTGCTGATGATAACTGGCTAAAGAGTGAATTCATCACAACTGTTCAGCAGCGTGGGGGTGCCATTATCAAAACAAGGAAGCTGTCTAGTGCATTATCAGCAGCAAGTGCTGCTTGTGATCATATACGTGATTGGGTTTTAGGTACACCTAAGGGAACATGGGTATCAATGGGAGTGTATTCTGATGGATCTTATGGTATCCAACCTGGCCTCATTTACTCTTTTCCTGTTACATGTGACAAAGGAGAATGGAATATTGTACAAGGGCTCAAGATTGATGAATTCTCAAGGGAAAAGATGGATAAAACGGCTCAAGAGCTCATTGAGGAGAAAACATTTGCTTATTCATGCCTTTAA 1116 0.397 MEMFALEILDHTVLQKIVLVLICTFLFWKIIRYMSGLLKVEKEPVIVLVTGAAGQIGYALVPMIARGMMLGPNQPVILHMLDIEPALEALKGVKMELIDAAFPLLRGVVATTDVVEACKDVNIAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEEHAAADCKVLVIANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISEKLNVHVSDVKNVIIWGNHSSTQYPDVNHATVATSNGQKKPVRELVADDNWLKSEFITTVQQRGGAIIKTRKLSSALSAASAACDHIRDWVLGTPKGTWVSMGVYSDGSYGIQPGLIYSFPVTCDKGEWNIVQGLKIDEFSREKMDKTAQELIEEKTFAYSCL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0034 371 Gene3D - 42 194 - -
Mal5g0034 371 TIGRFAM MalateDH-SF1: malate dehydrogenase 42 365 IPR010945 GO:0006108|GO:0016615
Mal5g0034 371 ProSitePatterns Malate dehydrogenase active site signature. 195 207 IPR001252 GO:0006108|GO:0016615
Mal5g0034 371 PANTHER MALATE DEHYDROGENASE 3, CYTOPLASMIC 24 371 - -
Mal5g0034 371 PIRSF Lac_mal_DH 41 368 IPR001557 GO:0016616|GO:0019752
Mal5g0034 371 SUPERFAMILY LDH C-terminal domain-like 196 370 IPR015955 GO:0003824|GO:0016616
Mal5g0034 371 Gene3D - 195 371 IPR015955 GO:0003824|GO:0016616
Mal5g0034 371 TIGRFAM MDH_euk_cyt: malate dehydrogenase, NAD-dependent 47 369 IPR011274 GO:0006108|GO:0030060
Mal5g0034 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 194 IPR036291 -
Mal5g0034 371 Pfam lactate/malate dehydrogenase, NAD binding domain 47 192 IPR001236 GO:0016491
Mal5g0034 371 PANTHER MALATE DEHYDROGENASE 24 371 IPR010945 GO:0006108|GO:0016615
Mal5g0034 371 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 196 364 IPR022383 GO:0016616
Mal5g0034 371 CDD MDH_cytoplasmic_cytosolic 43 368 IPR011274 GO:0006108|GO:0030060
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal5g0034 Mal-Chr5 593186 595951 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0034 K00025 - gmx:100783188 633.254