Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal5g0026 ATGACTCTCGTTTCCTCGCCAACTATGGCCACTTTTTCATCCACAGCTTCCAATCAGATTCGCTTTCTGCTCAACTCCTTGAACGAACTCAACTTTGACTCCGTTCTTCATCAACTCTCTCAGTTTACCGAGTTTGGAACCGTTGGATGCATTTTGCTGCTCCAAACTTGCTTGGATCACTTTAGTTATGTCGGAAGAGATAGAAAAGATATGCAACATGAGCCGATTCTTGCCGCAGTTGTTAAGTACCTCTTGGACAAACCTAACTTCAGCACCGTGTTTTCTGAGTCTATGAAGAATGTAGAAATTAATGAAAGCTTTCTCGAAAGCTTTTGTAATGGATTACGGTTGTCTTTATTGGAAAAAATTGCCATCAGTCTTGCTTTATCTGATTCTGAAAATCCCGATGCCAGGCTATGTGGCAAGAATTTTTGCATGGGTCAGGTTGAAGAATTGTGTGCCAATCCTGGTTCTTTGAGTTGCCATGAGCAAATTCACAGTGTTATCATGTTCCTCAGGCAGTCTGAGAGTCTTTCTGAGCATGTAGATTCCTTCATGCAGATATTATCACTGGTGCAGTTCAAGGACACGCCACCTTTTGTTTTGACCCCGTTGCTACCTGATGAGATGTATGAGACTAATATTTTAAGGTGGAATACGGAGTTCCTCCATGAGTGTGAAGAAAATGATTTCGATGCTATCTTGGCAGACATACAAAAGGAAATGAACATGGGGGACATTGTGAAGGAACTAGGTTATGGATGCACAGTTGATGTCTCACAGTGCAAGGAATTATTGTCACTCTTCTTACCTTTAACTGATAACATGCTCTCTAAATTACTCGGTGCTATTGCACACACCCATGCTGGGCTGGAGGATACCCAGAGCACATTTTCAACTTTTGGTGCGGCCCTTGGATACAACTTGTCTGAGTTACCACCACTGAACTCTTGGAATATTGATGTGTTGATAGATACAATCAAGAATCTTGCACCACAGACCAATTGGGTTCGGGTTATTGAAAATCTTGATCATGAAGGATTTTATCTTCCCAGTGAAGAAGCATTCTCTTTCCTCATGTCTGTTTATAAACGTGCCTGTAAGGAACCATTTCCACTCCATGCCATTTGCGGGTCTGTCTGGGAGAATACTGAGGGTCAGCTGTCTTTCCTTAAATATGCTGTATCTGCACCCCCAGAAATGTTTACCTTTGCACACTCTACGAGGCAACTGGCATATGTTGATGCGATTGATGACCACAAGCTTCAAAATGGACACGCAAATCATGCATGGCTGTGCATCGACCTTTTGGATGTCTTCTGCCAGCTAGCTGAGAAGGGTCATGCCAGTGTGGTTTGGTCAATCCTTGATTATCCCCTTAAACACTGTCCAGAAATTTTGCTTCTTGGAATGGCACATGTTAATACTACTTACAACCTCTTCCAGCGAGAAGTATCTATGATTGTTTTTCCCATGATAGTAAAAAATGATGCTGGTAGTGGAATGATTCTACACCTCTGGCACATCAATCCCAATATGGTCCTGCGAGGCTTCATGAATTCTCAAAACGGTGATGTAGACAGCATTGCGAGAATTGTGGACATCTGCCAAGAGCTTAAGATTCTATCATCAGTGGTGCAAATTATTCCCTCTTATTACAGCATAAGGTTAGCAGCTGTTGCTTCAAGGAAAGAAATTCTTGATCTCGAGAAGTGGTTGAGTAACAACTTAACAACGTACAAAGATGCCTTCTTTGAGGAGTGCCTGAAGTTCTTGAAGGAAGTCCAAGCTGGCGGATCACAAAATATTTCTGGCCAATCTTTTCATCAGTCTGGTGGTGTTCTGAATCTCTCTACTGAGACAACTGCTATGTTCTTGAAGGTTCTCAAATCTCATACTGACCTGGTTACCTCTGTACAACTTTCTGAGGAGCTGGAGAGGTTGAATATATCAATTGTAGATTCAAATCCAAGGCTTCAAAATAGTGGGGCTACTGATTCATCAACTTCTGATACAACATTTCCGGAAGATGTTGAAGCAGAAGCAAACAATATCTTCAAAGACATGTATCATGATAAGATAACTGTCACTAGAATGGTGCAAATACTAATCCAACGCAAGGAATCTTCTGAAAAAAGGGAGAGATTGGTTTTTGAATGCATGATTGCGAACTTGTTTGACGAGTATAAGTTTTACCCAAGGTATCCAGAACTGCAGCTTAAAATTGCAGGAGTTGCCTTTGGCTCTGTGATCAAGCATCATCTTGTGACACATCTCTCTCTCGGGATAGCTCTTCGTTATGTTCTTGATGCATTGCGCAAGCCTGCAGATTCTAAAATGTTCTTGTTTGGAAGTTTGGCATTGGAGCAGTTTGTAGATCGTCTTATTGAGTGGCCACAGTATTGCAATCACATTTTGCAAATTTCCCATTTGCGCAGCACACATTCAGAAATAGTTACTTTCATTGAACAGGCTCTTGCTAGGATATCCTCTGGTCATACTGATGTAGATGGGATGAGCCATGCTTCCGTTATCAGTAACCACAGTTCTGCCCAGGCTACATCAGGTCATGTAGAGCAGCTCAATGGCTCTAGCATCATACAACCTGGACAGCAGCATTTATCACTGCAGCTTCAACAGAGACGTGAGAGTCCTTTGGATGATCGTCAGAAGACCTCTGTTGGTTCATCTGCAGATATGAAACCACCATTAGCTTCTCTAGGGCAATCTACAGTAATAACACCGGCTGATGCTTCTAGTGCCAACAAGTTACATAGCACAGTCAGCGCTTCATCAATGTTATCTTCTTCTCCTGGTTTTGTCCGTCAATCCCGTGGGTTTGGATCTCCCTTGAATATTGAAACTTTGGTCGCTGCTGCAGAGAAAAGAGAAACTCCTATTGAGGCTCCAGGGTCAGAGGTTCAGGACAAGATATCATTTATAATTAATAATATCTCTTCTACGAATATTGAAGCCAAATCAAAAGAGTTCACAGAAATTTTGAAAGAGCAGTACTATGCATGGTTTGCACAGTATATGGTCATGAAAAGAGCAAGCATCGAACCAAATTTCCATGACATGTACCTGAAATTCCTGGACAAAGTTAATTCGAAGGCTTTGAACAAGGAGATTGTCCAGGCAACATATGAAAATTGCAAGGTTCTTTTAGGATCCGAACTCATAAAGTCAAGTTCAGAAGAGCGCTCCTTGCTTAAAAATCTTGGGAGCTGGCTTGGAAAGTTGACCATTGGACGGAATCAGGTTTTGAGGGCTCGTGAAATAGATCCGAAATCTTTGATTATAGAGGCATATGAAAAGGGGCTGATGATTGCTGTTATTCCATTTACTTCAAAGGTCCTTGAACCATGCCAAAGCAGTCTTGCATATCAACCCCCTAATCCTTGGACCATGGGCATCTTAGGATTGCTTGCTGAGATTTGTTCAATGCCAAACTTGAAAATGAACCTCAAGTTTGACATAGAGGTTTTATACAAAACTCTTGGCGTAAATATGAAGGATGTCACACCAACTTCTCTACTGAAGGATCGTAAAAGAGAAATCGAAGGAAATCCTGATTTCTCTAATAAAGATGTGGGGACATCTCAATCACAAATGCTTTCTGATATAAAATCTGGTCTTGTTCCTCCAGTAAATCAAGTAGAGCTACCGCTTGAAGTCACCAATCCATCCAATAGTGGGGCTCATCCACATATGCTGTCTCAGTATGCTGGTTCGCTTCATATTTCCTCGGGAACATTGATGGAAGATGAGAAAGTAGCACCTCTGAGCTTGTCTGATCAACTACCTTCTGCTCAAGGACTGTTACAAGCAAATACTACCCCAGCACCTTTCCAGCTCCCAACACAGATACAAAGTATTGGAACTCATGTTATTATAAATCCAAAGCTCAGTGCTTCTGGATTACAGATTCATTTCCAAAGGGCGGTACCTATTGCAATGGACAGAGCCATCAAAGAAATAGTGTCCAGTATTGTGCAGCGCAGTGTTTCCATAGCAACCCAGACAACAAAAGAACTTGTTTTAAAGGATTATGCTATGGAATCAGAGGAGAAACGTATAAAAAATGCTGCACACTTGATGGTTGCTAGTCTGGCTGGTAGTTTGGCTCACGTGACATGCAAAGAACCTTTACGGACATCAATATCAAATCAACTGAGGACTTCGCTTCAGAGTTTAAATATTGCAAATGAAATTTTGGAACAAGCTGTGCAACTTGTCACTAATGATAATCTAGATCTTGGTTGTGCAGTCATTGAACATGCTGCTACTGATAAGGCAATAAACACCATCGATACGGAGATTAGTCAACAACTTTCGTTGAGAAAGAAGCATCGAGAAGGTATGGGTTCTACATTTTTTGATGCAAACTTATATCCACAAGGTTCTATGGGTGGTGTTCCGGAGCCCCTTCGCCCCAAACCTGGTCAGTTGTCCCTATCACAACAGCGTGTCTATGAGGACTTTGTCCGGCTTCCTTGGCAAAACCAGTCTAGCCAGAGCTCACATTCAATGTCTGCTGGTGTTGCTCTTCAATCTGCTAACAGCGGTCTCACTGGCACAAACGTTCCTGCATCAGGACAGATAAACACTGGTTACTCCCTGAACGCAGGATATGAGGGGGTCTCTCGACCGATAGATGATCTGCCAGAATCTAATTTTGGTCCACATTTTAGTGCTTCCTCAATTCACATTAGAGCAGCTGACAATGTTTCCCAGCAGAGTATGGAGAAAGACTCTGTTGCCTCCTTTCCTTCAACTGCTTCCACCCCTGAGTTGCACACAGTGGATTCTTCAGATGCTGTGAAAGAATCTGGAGCTGGTTCACAGCCACTGGTTTCGTCAGGTGCCGTGGAGCGCATTGGAAGTAGCTTCTTGGAACCGTCTCTCACTACAAGGGACGCTCTGGATAAATACCAAATTGTCGCACAAAAGTTGGAAGCTGTGGTCAACAGTGACTCGAGGGAAGCAGAAATACAGGGTGTCATTTCTGAGGTACCTGAGATCATACTCAGATGTGTTAGTCGAGATGAGGCAGCTTTAGCTGTGGCTCAAAAGGTTTTCAAAGGTTTATATGACAATGCTTCAAACAACGTTCATGTCTGTGCTTATCTTGCAATCCTTATTGCCATTCGTGATGTTTGCAAGCTTGCTGTCAAGGAGCTTACTAGTTGGGTAATTTACTCGGAAGAAGAAAGGAAATATAATAAAGATATTACTGTTGGTCTCATCCGCAGTGAACTGCTAAATCTAACCGAGTACAATGTTCATATGGCAAAACTTATTGACGGGGGAAGAAATAAGGCTGCCACAGAGTTTTCAATATCTCTTCTTCAAACCCTGGTCATCGAGGAACCAAAAGTTATTTCAGAACTTCACAATCTTATTGATGCTTTGGCAAAGCTTGCTACAAAGCCTGGATCCCCTGAACTGTTACAACAACTAATTGAGATGATCAAGAATCCTGCTGCTTCATCTCCTAGTAATGCTGGAAAGGAGGATAAGGCGAAGCAATCAAGAGACAATAAGGGTCCTGGTCTGCTTGTTGTAAACAGGGAAGAGTTAAACATTGTAGAATCTGCTGCACCTGATCCTGCTGGATTCCGTGAACAGGTTTCCATGTTGTTCGCTGAATGGTATAGGATATGCGAACTTCCCGGGGCCAGTGATACAGCTTCTACCCACTTCACCGTGCAATTGCACCAGAGTGGGCTGCTTAAAGGGGATGATATGACAGATCGCTTTTTCCGTCTGTTGATGGAAATTGCAGTTGCACATTGCTTATCCACTGAGGGGATTAATTCAGGGTCACTGCAATCTCCTCAACAGATGCCAACAATGTCTTTTCTCGCAATTGATATTTATGCAAAGCTTGTCTTCTCAATCTTGAAGGGATCAAGCAAACTTCTCTCCAAGATTCTGGCAGTTACTGTCAGATTCATTGCAAAAGATGCAGAGGAGAAGAAGGTCTCTTTTAATCCAAGACCATTTTTCAGATTGTTCATCAATTGGCTTCTGGATCTTGGCTCACTTGAGCCTGTTACTGATGGTGCAAATCTCCAGATGTTGACTACTTTTGCCAATGCATTTCATGCTCTACAGCCACTCAAAGTTCCTGGATTCAGTTTTGCTTGGCTGGAGTTGGTTAGTCATAGGAGCTTCATGCCAAAAATGCTGACTGGTAATGGTCAAAAAGGTTGGCCGTATATCCAAAGGTTGCTTGTAGATTTGTTCCAATTTATGGAGCCTTTTCTGAGGCATGCTGAACTAGGAGATCCGGTCCGTGTTCTCTATAAAGGCACACTTAGGGTGCTCTTGGTGCTACTTCATGACTTCCCAGAGTTCCTATGTGACTATCACTTTACCTTCTGTGATGTTATTCCCCCAAGTTGCATTCAGATGCGAAATATCATCCTAAGTGCATTTCCGCGTAGTATGAGGCTGCCAGATCCTTCAACTCCAAATTTGAAGATTGATTTGCTTCAAGAAATAACTCAATCCCCTCGCATTCTTTCTGAGGTTGACGCAGCAGTGAGAGCGAAGCAGATGAAGGCTGACATAGATGAATACCTTAAGACAAAGCAACAAAGCTCTCCATTTTTATCTGAACTAAAAGAGAAGCTACTCCTCTCACCCAATGAAGCTGCCTCTGCCGGCACTCGTTACAATGTGCCATTAATCAACTCCCTTGTACTGCATGTCGGAATGCAGGCAATCCAGCAGATAGAGCAGGAGCATGGACGAACTCCCCATGCACAATCAGCAACAAATGCATTCCAACAACATCTATATGCTCCTACAAATTCTCCTACAAATGTTGTGGCTGCTTTGGATATTTTCAAGACACTAGTCATTGAATTGGACACCGAAGGACGTTACCTTTTCCTAAATGCTGTTGCTAACCAACTACGTTATCCCAATACTCACACACACTACTTTTCCTTCGTCATCCTTTACTTGTTTGCAGAATCAAACCAGGAAATTATCCAAGAACAAATTACAAGAGTCTTGCTAGAACGCCTCATTGTAAACCGACCTCATCCCTGGGGCCTCCTCATTACTTTCATTGAGCTGATCAAGAATTTAAGGTATAATTTCTGGAACCGGTCTTTCATAAGATGCGCACCAGAGATCGAAAAACTTTTTGAATCAGTCTCAAGATCTTGTGGAGGTCCAAAACCAGCGGAGGATAGTTTGGTCTCAGGTTGGGGTCTGACATGA 7239 0.4253 MTLVSSPTMATFSSTASNQIRFLLNSLNELNFDSVLHQLSQFTEFGTVGCILLLQTCLDHFSYVGRDRKDMQHEPILAAVVKYLLDKPNFSTVFSESMKNVEINESFLESFCNGLRLSLLEKIAISLALSDSENPDARLCGKNFCMGQVEELCANPGSLSCHEQIHSVIMFLRQSESLSEHVDSFMQILSLVQFKDTPPFVLTPLLPDEMYETNILRWNTEFLHECEENDFDAILADIQKEMNMGDIVKELGYGCTVDVSQCKELLSLFLPLTDNMLSKLLGAIAHTHAGLEDTQSTFSTFGAALGYNLSELPPLNSWNIDVLIDTIKNLAPQTNWVRVIENLDHEGFYLPSEEAFSFLMSVYKRACKEPFPLHAICGSVWENTEGQLSFLKYAVSAPPEMFTFAHSTRQLAYVDAIDDHKLQNGHANHAWLCIDLLDVFCQLAEKGHASVVWSILDYPLKHCPEILLLGMAHVNTTYNLFQREVSMIVFPMIVKNDAGSGMILHLWHINPNMVLRGFMNSQNGDVDSIARIVDICQELKILSSVVQIIPSYYSIRLAAVASRKEILDLEKWLSNNLTTYKDAFFEECLKFLKEVQAGGSQNISGQSFHQSGGVLNLSTETTAMFLKVLKSHTDLVTSVQLSEELERLNISIVDSNPRLQNSGATDSSTSDTTFPEDVEAEANNIFKDMYHDKITVTRMVQILIQRKESSEKRERLVFECMIANLFDEYKFYPRYPELQLKIAGVAFGSVIKHHLVTHLSLGIALRYVLDALRKPADSKMFLFGSLALEQFVDRLIEWPQYCNHILQISHLRSTHSEIVTFIEQALARISSGHTDVDGMSHASVISNHSSAQATSGHVEQLNGSSIIQPGQQHLSLQLQQRRESPLDDRQKTSVGSSADMKPPLASLGQSTVITPADASSANKLHSTVSASSMLSSSPGFVRQSRGFGSPLNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISSTNIEAKSKEFTEILKEQYYAWFAQYMVMKRASIEPNFHDMYLKFLDKVNSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKVLEPCQSSLAYQPPNPWTMGILGLLAEICSMPNLKMNLKFDIEVLYKTLGVNMKDVTPTSLLKDRKREIEGNPDFSNKDVGTSQSQMLSDIKSGLVPPVNQVELPLEVTNPSNSGAHPHMLSQYAGSLHISSGTLMEDEKVAPLSLSDQLPSAQGLLQANTTPAPFQLPTQIQSIGTHVIINPKLSASGLQIHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYAMESEEKRIKNAAHLMVASLAGSLAHVTCKEPLRTSISNQLRTSLQSLNIANEILEQAVQLVTNDNLDLGCAVIEHAATDKAINTIDTEISQQLSLRKKHREGMGSTFFDANLYPQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSAGVALQSANSGLTGTNVPASGQINTGYSLNAGYEGVSRPIDDLPESNFGPHFSASSIHIRAADNVSQQSMEKDSVASFPSTASTPELHTVDSSDAVKESGAGSQPLVSSGAVERIGSSFLEPSLTTRDALDKYQIVAQKLEAVVNSDSREAEIQGVISEVPEIILRCVSRDEAALAVAQKVFKGLYDNASNNVHVCAYLAILIAIRDVCKLAVKELTSWVIYSEEERKYNKDITVGLIRSELLNLTEYNVHMAKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHNLIDALAKLATKPGSPELLQQLIEMIKNPAASSPSNAGKEDKAKQSRDNKGPGLLVVNREELNIVESAAPDPAGFREQVSMLFAEWYRICELPGASDTASTHFTVQLHQSGLLKGDDMTDRFFRLLMEIAVAHCLSTEGINSGSLQSPQQMPTMSFLAIDIYAKLVFSILKGSSKLLSKILAVTVRFIAKDAEEKKVSFNPRPFFRLFINWLLDLGSLEPVTDGANLQMLTTFANAFHALQPLKVPGFSFAWLELVSHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGDPVRVLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRILSEVDAAVRAKQMKADIDEYLKTKQQSSPFLSELKEKLLLSPNEAASAGTRYNVPLINSLVLHVGMQAIQQIEQEHGRTPHAQSATNAFQQHLYAPTNSPTNVVAALDIFKTLVIELDTEGRYLFLNAVANQLRYPNTHTHYFSFVILYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNLRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPAEDSLVSGWGLT* 2413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal5g0026 2412 MobiDBLite consensus disorder prediction 872 905 - -
Mal5g0026 2412 MobiDBLite consensus disorder prediction 1577 1618 - -
Mal5g0026 2412 Pfam CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 1311 1452 IPR024557 -
Mal5g0026 2412 MobiDBLite consensus disorder prediction 890 905 - -
Mal5g0026 2412 Gene3D - 663 831 IPR038535 -
Mal5g0026 2412 Gene3D - 2155 2396 - -
Mal5g0026 2412 Pfam CCR4-NOT transcription complex subunit 1 HEAT repeat 486 630 IPR032194 -
Mal5g0026 2412 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX 13 2409 IPR040398 GO:0017148|GO:0030015
Mal5g0026 2412 Coils Coil 1396 1416 - -
Mal5g0026 2412 Pfam CCR4-NOT transcription complex subunit 1 CAF1-binding domain 967 1187 IPR032191 -
Mal5g0026 2412 Pfam CCR4-Not complex component, Not1 2012 2391 IPR007196 -
Mal5g0026 2412 MobiDBLite consensus disorder prediction 1829 1851 - -
Mal5g0026 2412 PANTHER BNACNNG58980D PROTEIN 13 2409 - -
Mal5g0026 2412 MobiDBLite consensus disorder prediction 1577 1620 - -
Mal5g0026 2412 Pfam CCR4-NOT transcription complex subunit 1 TTP binding domain 665 828 IPR032193 -
Mal5g0026 2412 MobiDBLite consensus disorder prediction 2393 2412 - -
Mal5g0026 2412 Gene3D - 942 1189 - -
Mal5g0026 2412 Gene3D - 1863 2154 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal5g0026 K12604 - gmx:100783935 3986.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0026 5 434075 457125 Mal5g0026 5 434075 457125 ECH