Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3891 ATGAAACCTTACACTTTGTATTCCTCATTGGAAATGCTTACAAAACTTATGAGCAATAATGTCTCATCTAACCATCTTTTTGCAGTGCTTTTGGTAGTAGGTTTAGCAACCCTTTACTTTGCATGTAGAAGAAAAGTACACATTTATTTGATTGATTTTACCTGTTATTGTCCCCCAAGCTCTTATAGACTACCTAAAGCCATGTTTGAAGAAAACAATATTTATGATGATATGGAACAAGAAGCTGTTGATTTCCAAAGCAAAATCAGTGCAAAATCTGGATTCAGTGATGAAACATCCATTCCTCCATCTCTTGCTCAAATACCAAAAAGTAAAGCTCTCACCTTTGCACTTGAAGAAGCTGAGTTAATAATGTATTCAGCTATTAAAGACCTTTTACAAAAAACCAAAATCAACTCAAAATCCATTGACATTATAATAACTATTAGTAGCATCTTCTGTCCTACGCCGTCTCTTAGTTCAATGGTGGTTAACAAGTTCAAGATGAGAAGCAACATCATGAGTTTTCATCTATCAGGTATGGGATGCAGTGCTGGAATTATAGCTGTTGGTCTTGCAAAAGACTTGTTGAGAGTTCATAGAAACTCACTGGCTTTAATAGTAAGCACAGAGACACTTAGTTTAAATTGGTACACAGGTAAAGTTCCATCTATGCTACTAACTAATTGTCTATTCAGAATGGGAGGATCAGCTATATTGATGTCAAGCAGGGTTCAAGATAAGCATAAGGCAAAATATGAGCTAAAACATATTGTTAGAACAATCAATGCATATGATGATCAATCTTATGCATGTGTATACCAGGATGTGGATTCAGAGAACAAAGAAGGTGTGTCGATATCGAAGAACATAGTCAATGTTTGTGGAGATGTGTTGAAGAAAAATATTGCTTCATTGGGACCATTGGTTTTGCCATGGAGGGAGCAATTCTTATATGTAATTTCAATTATTTATTATAAACTATGGACTAGAAGAAGAACAAGCATATATACTCCAAAATTTAACAGGGCTTTTGAGCATTTCTGTATACATTCAGGAGGGAGAGCTGTTATACAAGCCATTGAGAAAAACTTGAGGCTAAGGAAAGAGGATGTTGAGCCATCAAAAATGACTCTTTACAGATTTGGAAACACTTCATCTTCTTCAATTTGGTATGAGTTGCAATACATAGAAGCTAAAGGGAGGATGAAATGTGGAGATAGGGTGTGGCAAATTGCCTTTGGAAGTGGATTCAAGTGTAACAGTGCAGTGTGGAAATGTCTACGTGACGTGAAGCCTGATACCACCACTGCGTGGAGAGACACTATTCACTCGTACCCAGTAGATATTTTGGGAGCAAACTGA 1365 0.3648 MKPYTLYSSLEMLTKLMSNNVSSNHLFAVLLVVGLATLYFACRRKVHIYLIDFTCYCPPSSYRLPKAMFEENNIYDDMEQEAVDFQSKISAKSGFSDETSIPPSLAQIPKSKALTFALEEAELIMYSAIKDLLQKTKINSKSIDIIITISSIFCPTPSLSSMVVNKFKMRSNIMSFHLSGMGCSAGIIAVGLAKDLLRVHRNSLALIVSTETLSLNWYTGKVPSMLLTNCLFRMGGSAILMSSRVQDKHKAKYELKHIVRTINAYDDQSYACVYQDVDSENKEGVSISKNIVNVCGDVLKKNIASLGPLVLPWREQFLYVISIIYYKLWTRRRTSIYTPKFNRAFEHFCIHSGGRAVIQAIEKNLRLRKEDVEPSKMTLYRFGNTSSSSIWYELQYIEAKGRMKCGDRVWQIAFGSGFKCNSAVWKCLRDVKPDTTTAWRDTIHSYPVDILGAN* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3891 454 PANTHER 3-KETOACYL-COA SYNTHASE 21-RELATED 19 451 - -
Mal4g3891 454 Pfam FAE1/Type III polyketide synthase-like protein 41 327 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mal4g3891 454 Gene3D - 60 426 IPR016039 GO:0016746
Mal4g3891 454 PANTHER 3-KETOACYL-COA SYNTHASE 19 451 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal4g3891 454 PIRSF Very_long_ch_3-ktacl-CoA_syn 3 454 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mal4g3891 454 SUPERFAMILY Thiolase-like 37 244 IPR016039 GO:0016746
Mal4g3891 454 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 345 426 IPR013747 -
Mal4g3891 454 SUPERFAMILY Thiolase-like 256 429 IPR016039 GO:0016746
Mal4g3891 454 CDD CHS_like 29 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3891 Mal-Chr4 113132804 113134168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3891 39 448 Acyl Lipid Metabolism Gene Families AT1G71160 54.501 2.65e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3891 K15397 - gmx:100783404 701.434