Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3865 ATGAGTCAGGAATCGTTCATATACAGCTTTGTAGCTCGTGGAACAATGGTGTTAGCTGAGTACACCGAGTTCACTGGTAACTTCCCTGCCATTGCAGCTCAGTGTCTTCAGAAACTACCTTCTTCCAATAACAAGTTCACCTACAGCTGTGACCATCACACCTTCAATTTTCTGGTTGAAGATGGTTATGCTTACTGTGTTGTTGCCAAAGAATCTGTTAGCAAGCAGATCTCTATTGCTTTCCTTGAACGTGTCAAAGCTGACTTTAAGAAGAGATATGGTGGGGGAAAAGCAGATACAGCTATTGCCAAAAGTCTGAACAAGGAATTTGGACCGATTATGAAAGAACACATGAAGTATATCATTGATCACGCTGAGGAGATTGAAAAGCTATTAAAAGTGAAGGCTCAAGTTTCAGAAGTTAAAAGCATCATGTTAGAAAATATAGACAAGGCTATTGATAGAGGAGAAAATTTAACTGTTCTTTCAGACAAGACTGAGACATTGCGCTCACAGGCTCAAGATTTCAGAAAGCAAGGGACACAGGTCCGTCGGAAGATGTGGTATCAGAACATGAAAATTAAATTGGTTGTTCTTGGAATTCTGTTGTTTTTGGTTCTGGTTATCTGGCTCTCTATTTGTGGTGGATTTAACTGTTCAAATTAG 666 0.3964 MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYSCDHHTFNFLVEDGYAYCVVAKESVSKQISIAFLERVKADFKKRYGGGKADTAIAKSLNKEFGPIMKEHMKYIIDHAEEIEKLLKVKAQVSEVKSIMLENIDKAIDRGENLTVLSDKTETLRSQAQDFRKQGTQVRRKMWYQNMKIKLVVLGILLFLVLVIWLSICGGFNCSN* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3865 221 ProSiteProfiles Longin domain profile. 10 114 IPR010908 -
Mal4g3865 221 CDD R-SNARE 129 188 - -
Mal4g3865 221 ProSiteProfiles v-SNARE coiled-coil homology domain profile. 130 190 IPR042855 -
Mal4g3865 221 Pfam Regulated-SNARE-like domain 32 110 IPR010908 -
Mal4g3865 221 SMART Longin_2 31 113 IPR010908 -
Mal4g3865 221 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 1 220 - -
Mal4g3865 221 Pfam Synaptobrevin 129 215 IPR042855 -
Mal4g3865 221 Gene3D Longin domain 1 126 - -
Mal4g3865 221 PANTHER SNARE PROTEINS 1 220 - -
Mal4g3865 221 CDD Longin 7 120 IPR010908 -
Mal4g3865 221 SUPERFAMILY SNARE-like 6 121 IPR011012 -
Mal4g3865 221 SUPERFAMILY SNARE fusion complex 126 192 - -
Mal4g3865 221 Gene3D - 127 214 - -
Mal4g3865 221 ProSitePatterns Synaptobrevin signature. 148 167 IPR001388 GO:0016021|GO:0016192
Mal4g3865 221 PRINTS Synaptobrevin signature 191 210 IPR001388 GO:0016021|GO:0016192
Mal4g3865 221 PRINTS Synaptobrevin signature 135 154 IPR001388 GO:0016021|GO:0016192
Mal4g3865 221 PRINTS Synaptobrevin signature 155 174 IPR001388 GO:0016021|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3865 Mal-Chr4 112608645 112611928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3865 1 220 Miscellaneous Gene Families AT1G04760 68.182 1.19e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3865 K08511 - gmx:100527252 410.223