Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3838 ATGGCTCCAGTACCAATTTCTAGCATCAACGTAGGACACATTGATGATGTACAAGAATTAAGAAGAACTAAGCCAAAGACAGTTCCTCAAAGATTTGTTAGAGACATGACAGAAAGACCAACACTTCAACCAGTTCTTTCCCCACAAAACAGTGACATGCCTGTCATTGATTTCTCTAAGTTTAGTAAAGGGAACAAAGAGGAAGTTTTGTATGAACTTTCCAAGCTTTCAACTGCTTGTGAGGAGTGGGGATTTTTTCAGGTGATTAATCATGAGATTGACCTTAATCTGATGGAGAACATAGAGGATATGAGTAAGGAGTTTTTCATGCTACCTTTGGAAGAGAAACAGAAGTACCCTATGGCTCCAGGAACAGTTCAAGGCTATGGACAAGCTTTTGTTTTCTCAGAGGACCAAAAACTTGATTGGTGCAACATGTTTGCTCTAGGAATTGAACCTCACTATATTAGGAACTCAGATCTTTGGCCAAAGAAACCAGCAAGACTCAGTGAAACAATAGAATTGTACTCAAGAAAAGTAAGAAAACTTTGCCAGAATTTGCTCAAATACATAGCTTTAGGCCTGAGTTTGGAAGAAGATGTCTTTGAGAAGATGTTTGGTGAAGCAGTACAAGCCATAAGAATGAATTACTATCCAACATGTTCAAGACCTGACCTTGTTATGGGTCTGAGTCCTCATTCAGATGGAAGTGCCCTCACTGTGTTGCAGCAAGCAAAGGGAAGCCCAGTGGGCCTTCAAATACTTAAAGACAACACATGGGTCCCTGTTGAACCAATTCCAAATGCTCTTGTTATCAACATTGGAGACACAATAGAAGTTCTTACAAATGGAAAATACAAGAGTGTGGAGCATAGAGCTGTGGCTCATGAGGAAAAAGACAGGCTCTCAATTGTGACATTTTATGCTCCTAGCTATGAAGTAGAGCTTGGACCAATGCTAGAACTTGTGGATGAAAACCACCCATGCAAGTATAGAAGATACAATCATGGAGAGTATAGTAAACATTATGTAACAAATAAGTTACAAGGAAAAAGGACCCTGGACTTTGCCAAGATGGAAATTATGAATAATACAAACTAG 1101 0.3933 MAPVPISSINVGHIDDVQELRRTKPKTVPQRFVRDMTERPTLQPVLSPQNSDMPVIDFSKFSKGNKEEVLYELSKLSTACEEWGFFQVINHEIDLNLMENIEDMSKEFFMLPLEEKQKYPMAPGTVQGYGQAFVFSEDQKLDWCNMFALGIEPHYIRNSDLWPKKPARLSETIELYSRKVRKLCQNLLKYIALGLSLEEDVFEKMFGEAVQAIRMNYYPTCSRPDLVMGLSPHSDGSALTVLQQAKGSPVGLQILKDNTWVPVEPIPNALVINIGDTIEVLTNGKYKSVEHRAVAHEEKDRLSIVTFYAPSYEVELGPMLELVDENHPCKYRRYNHGEYSKHYVTNKLQGKRTLDFAKMEIMNNTN* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3838 366 Pfam 2OG-Fe(II) oxygenase superfamily 211 310 IPR044861 -
Mal4g3838 366 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 361 - -
Mal4g3838 366 Gene3D - 12 351 IPR027443 -
Mal4g3838 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 310 IPR005123 -
Mal4g3838 366 SUPERFAMILY Clavaminate synthase-like 16 351 - -
Mal4g3838 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 164 IPR026992 -
Mal4g3838 366 PANTHER PROTEIN SRG1 10 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3838 Mal-Chr4 112118684 112121272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3838 52 354 Glycosyltransferase AT5G59530 35.849 9.27e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3838 - - gmx:100785152 634.795