Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3767 ATGAGGGATATGGCTTTGCAGAAGAAGTATGTTCCTTCCCGCGATGCACCTACTGTTAATTTGAAACATTTGAGTTTCTCCAGTAAGGCCCCTGAGAAAACTCAGCCTGATGTGGCAAATCAGAATCATGACATGGATGTGGATGTTGACCTTGGGGAAGTTTATTTTCTCATTATGCACTTCCTTTCTGCTGGGCCATGTCGTAAAACCTATTCAGAGTTTTGGAATGAGCTTCTGGAGAATCAACTTTTGCCTAGAAGGTATCATGCTTGGTATTCAAGGAGTGGGGCATCCAGTGGAGTTCCAGATGATGATGGTCAATCATTCCCTTTAGGTTACAAAAAACTGGCGGAGAGGTATCCTCATATTGAAAAGGATCACTTGGTAAAGCTTTTGAAGCAATTGTTATTAAATACAGCCTCCCTGTCACCAGGCATGAGTACTGGAAATGCTCCAAATGCAGCTGATGTACCCACTCTTCTAGGAAAGGGATCCTTTTCACTTCTGAGCTATGATAGGGATAAAGTGAATGAAGAAGTCAAATCACCACCCCCTTATATGCGCTGGCCTCATATGAAAGCCAATCAGGTTCACGGGCTTCATTTGAGGGAAATCGGAGGAGGTTTTCCAAGACACCACCGTGCACCCTCTATACGTGCTGCATGCTATGCCATTGCAAAACCTTCTACTATGGTACAGAAGATGCAAAACATCAAGAGAATAAGGGGACACCGTAATGCTGTTTATTGTGCTATATTTGATCGGTCAGGAAGATATGTTATTACTGGTTCAGATGATCGACTCGTAAAAATTTGGTCAATGGAAACTGCATATAGTTTGGCCAGTTGCCGTGGACACGATGGTGACATTACTGACTTGGCTGTGAGTTCAAACAATGCTTTAGTTGCATCCTCATCAAATGACTGTATTATTCGAGTTTGGCGCTTGCCAGATGGCTTACCAATATCAGTTTTGCGGGGACATACTGGAGCTGTTACAGCCATAGCCTTTAGTCCCAGACCTAATGCTATTTACCAGCTTTTATCTTCCTCTGACGATGGAACTTGTAGGATATGGGATGCAAGGTATACCCAGTCAAGTCCAAGATTATATGTTCCAAAGCCTTCTGATTCTGCTGGAAGGAGCAGTGGCCCATCATCAAATACAATTCCACAGAGTCATCAAATTTTTTGCTGTGCATTTAATTCTAATGGAACTGTCTTCGTCACTGGTAGCTCTGATAATCTTGCCAGGGTTTGGAATGCTTGTAAACTTAGTATGGAAGACGTGGACCAACCAAATCATGAGATAGATGTACTGTCTGGTCATGAAAATGATGTAAACTATGTGCAATTTAGTGGATGTGCAGTAGCATCTCGATTTTCAACAACAGAAACTTGGAAGGAAGAAAATATTCCCAAATTTAAGAATTCCTGGTTGAATCATGACAACATAGTTACCTGCTCTCGTGATGGGAGCGCTATTATATGGATTCCCAAATCACGCAGGTCACATGGAAAAAGTGGTCGCTGGACTCGGGCATATCATCTCAGAGTTCCACCTCCACCTATGCCTCCACAACCTCAGAGAGGTGGTCCACGCCAGAGAATTCTACCAACTCCACGTGGCGTAAATATGATTGTTTGGAGCCTAGACAACCGCTTTGTCCTTGCAGCTATTATGGATTGCAGAATCTGTGTTTGGAATGCTTCTGATGGCAGCTTAGTGCACTCATTGACTGGACATACCGAATCTACATATGTTCTGGATGTTCATCCTTTTAATCCGCGGATAGCAATGAGTGCTGGATATGATGGAAGAACTATTGTATGGGATATATGGGAAGGCTTGCCTATCAGGATATATGAGATATCACGTTTCAAGTTGGTAGATGGAAAATTTTCTCCGGATGGGACATCAATCATACTATCTGATGATGTTGGTCAACTATATATATTAAACACGGGCCAAGGTGAGTCCCAGAAAGATGCCAAATATGATCAGTTCTTTCTTGGTGATTATCGGCCTCTCATTCAAGACACGCATGGTAATGTACTTGACCAGGAAACTCAGATGATTCCATATCGGCGTAATTTGCAAGATTTGCTTTGTGATTCAGCAATGATGCCATACCCAGAACCTTATCAGAGTGAATTTCAGCGGAGACGACTAGGAGCTTTAGGCCATGATTGGCGCCCGTCACAGCTGAAGCTTGCTGTTGGCCCTGATTTCAGCCTGGACCCAGAGTATCATATCCTTCCATTGGCTGACTTGGACATGCTAGCAGAACCCCTACCAGAGTTTATAGATGCTATGGATTGGGAGCCAGAAATCGAAGCGTTTGTTGATGATACTGATTCAGAATATAATTTAACTGATGATAGTTCTTCCCGGGGTGAGAAAGAATGTTCAAGCTCCAATGCCTCTGGTGATCCTGGTTGCAGCACAGATAACAGTGACGATGAAGACACTCACATGGATTGCATTCGTAGATCGAAGAGGAAAAAACAGAAGACCGGAATTGAGACTATGACTTCTTCTGGGAGGCGTATTAAAAGGAGGAATTTGGATGAGTGTGAAGCAAATGTTCACAGTGGTAGCCGAAGTAGGAAGGGAAAAAGTGGACAAAAAACATCAAGGAGGAAATCTGCTAAATCAAAATCTTCCAGACCTCAAAGAGCTGCTGCACGCAATGCTCTGCATTTATTCTCAAAAATTACAGGTACACCAAATGAAGGAGAAGAAGATAGTTTGGTTGGTGATTCTTCAGATAGTGACTCGACATTGCAAGAGTCTAATATTGACAGTGATGAATCCGGTAGAGCTTCCCAAAACGACCAACGGAATTATTCCAAGGGAAAAGAAGTTTTACTGTATGATGAATCAGAGGACTCAAAATCTCACGAATTGACTGAGACTCATGTAAACAGGAGGAGGTTGGTCCTCAAATTGCCAGTTCGGGGTTCATCTAAACCCACACATGAGTTTGGGGACCAGGCTGAGTTGGTTGGCTCATCGTCAAAAACTGCTCAAGAATCTCCTGATTTTAATAGGAACGGACCAAGTTCTACAGAGCCAGGATATTGTTTAGGCAATGGAAGTTACTCTTCAATCGAAAGAACTGATCAAGTAAAACTTGACCAGGTAACAGACCATGTAGACTTACTAGAGAAACTTAGATGGGGGGTGGTTAGGGCTCGTTCATCTAAACCTCTCAGAGTGAGAGAAGCTGTGCCACTAGGTGCAAATCCCAACTCTATAGAATTTCCTAACCATCTCAATGAAGAAGAAATTGTTAGTATTGGGCCTGAGAAAGAGGACAAGGACTTCAGCGGTACATCAACCTCTGCTTTAGAAATCCAAAATGGTGATAAGTTAGATAGTTTGACAGAAATAAATGAAAATTGTGCTGGCACTACCTCTCAGCCTTTTAATCTTACTGAGAATGGAGAACCACTCACAGCTTCCAGCAATTACAGGGATCCAGATGAATCACTAGTTTCTGCAAGCATGATTCCTGAGAATAATATTCTTGTATCTGTCGGCCATAGTGGGGCTGACCAACTACCTGAACCAAATATTGGTTTTCCTTCTGTTTCAACAAAGCTAAGGTCTAAAAGGGGTGCGAGGAATCCTGAAAGTCCATGTAAGCCTGAAACAAAATCTTCAGTGCTAAAGAATAATGCATCTAGCAGTAATGCTAATAATAATTTGAACAATGAAGAGCACATGGTTGCGGTTAAGGATGACAACAATACTGGAGTAACATCTAATCAGAGAGAAAATGGTTCTCCAGAAGTTGATGCTCAGGCTAAGCAAGTTAGTACTTCTCATGATTCACTAGAACCACATTCAAATAGAGATAAAATGTTCAAAGCTGTTTATAGAAGATCAAGATCACATAGGGCTGTGAATAATTTAGCTGATGGTAGTGGCTTGGGGGAATCCACTTCAAATGGTAGCAACAGTAATTTTAATGTGGCATTGGACAGTAATGGCACAAATGAAGCTCTTCATACCAATGGTTCCCTAGAGTTGGAACATGGTACTTGTGTCCTAAATAATGTGCGGAGTAATCTTAAAGTGCAGCAAGGAAATGGATCTTGTATGGTTAGAATTCCTCAGAATGTTTCCCCAAATAAAGGAAAGCTCACAGAAGAAGAAAGGGGTTCTAGTTCAAAATTGACTGTCGGTTTGAGGTCTACTAGGAATCGGAGGTCTACTTATAATATCCGTGAGACTAGTCCTGTAAATAATAGAAGGAAATCACTACAATCAGCTGTGAAGGGGTCCTGGTTGCTGTTATCAACGCATGAGGAAGGATGTAGATATATTCCTCAACAAGGTGATGAAGTTGTATATCTAAGACAGGGACACCAGGAATATATAGAATATAGCCGTAAAAGAGAGTCGGGGCCTTGGGTGTCACTTAAGGAACATCTAAGAGCTGTTGAATACTGTAGAGTTCAAAGCCTTGAGTATTCTCATGTTCCAGGGTCTGGTGATAGCTGCTGCAAAATGGCTCTTCAGTTTGTAGATCCAAATTCAAGTGTTGTTGGCAAAACTTTTAAATTAACCCTACCTGAAGTGACTAGTTTCCCTGATTTTCTTGTTGAAAGAACTAGGTTTGATGCTGCTATCCAAAGAAATTGGACACGCAGGGATAAATGCAGGGTTTGGTGGAAGAATGAGGATAACTCCTCTGGTAATTGGTGGGAGGGTCGAATTCAGTTTGTAAAAGCCAAATCATCTGAATTTCCAGACAGTCCTTGGGAGAGATATAGTGTTCGGTACAAGAGCGACCTCTCTGATGAACATCTGCATAGTCCTTGGGAGCTTTTTGATGCTGATACTCAATGGGAACAGCCTCATATTGATGATCTCGCAAGAAATAAACTGTTATCTGCTCTCACCAAAGTACAGCAGTCGGGAAACACAGTTCAGGATCGATATGGATTGCATGAATTGGAGAAAATTTCAAATAAGTCGAAATTCACGAACAGATTTCCCGTTCCTGTGTCTATTGAATTGATACAATCAAGGTTGGAGAATAGTTACTACCGAAGTTTGGAGGCACTGAAGCATGATGTCTCAATTCTACTGTCCAATGCCAACTCGTTTTTTGAAAAGGATGCTGAGATGACAACCAAAATCAAACGCCTAACTGAGTGGTTCGCTAAGACATTATCATCTTTATAG 5199 0.4187 MRDMALQKKYVPSRDAPTVNLKHLSFSSKAPEKTQPDVANQNHDMDVDVDLGEVYFLIMHFLSAGPCRKTYSEFWNELLENQLLPRRYHAWYSRSGASSGVPDDDGQSFPLGYKKLAERYPHIEKDHLVKLLKQLLLNTASLSPGMSTGNAPNAADVPTLLGKGSFSLLSYDRDKVNEEVKSPPPYMRWPHMKANQVHGLHLREIGGGFPRHHRAPSIRAACYAIAKPSTMVQKMQNIKRIRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYSLASCRGHDGDITDLAVSSNNALVASSSNDCIIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPNAIYQLLSSSDDGTCRIWDARYTQSSPRLYVPKPSDSAGRSSGPSSNTIPQSHQIFCCAFNSNGTVFVTGSSDNLARVWNACKLSMEDVDQPNHEIDVLSGHENDVNYVQFSGCAVASRFSTTETWKEENIPKFKNSWLNHDNIVTCSRDGSAIIWIPKSRRSHGKSGRWTRAYHLRVPPPPMPPQPQRGGPRQRILPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGLPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQKDAKYDQFFLGDYRPLIQDTHGNVLDQETQMIPYRRNLQDLLCDSAMMPYPEPYQSEFQRRRLGALGHDWRPSQLKLAVGPDFSLDPEYHILPLADLDMLAEPLPEFIDAMDWEPEIEAFVDDTDSEYNLTDDSSSRGEKECSSSNASGDPGCSTDNSDDEDTHMDCIRRSKRKKQKTGIETMTSSGRRIKRRNLDECEANVHSGSRSRKGKSGQKTSRRKSAKSKSSRPQRAAARNALHLFSKITGTPNEGEEDSLVGDSSDSDSTLQESNIDSDESGRASQNDQRNYSKGKEVLLYDESEDSKSHELTETHVNRRRLVLKLPVRGSSKPTHEFGDQAELVGSSSKTAQESPDFNRNGPSSTEPGYCLGNGSYSSIERTDQVKLDQVTDHVDLLEKLRWGVVRARSSKPLRVREAVPLGANPNSIEFPNHLNEEEIVSIGPEKEDKDFSGTSTSALEIQNGDKLDSLTEINENCAGTTSQPFNLTENGEPLTASSNYRDPDESLVSASMIPENNILVSVGHSGADQLPEPNIGFPSVSTKLRSKRGARNPESPCKPETKSSVLKNNASSSNANNNLNNEEHMVAVKDDNNTGVTSNQRENGSPEVDAQAKQVSTSHDSLEPHSNRDKMFKAVYRRSRSHRAVNNLADGSGLGESTSNGSNSNFNVALDSNGTNEALHTNGSLELEHGTCVLNNVRSNLKVQQGNGSCMVRIPQNVSPNKGKLTEEERGSSSKLTVGLRSTRNRRSTYNIRETSPVNNRRKSLQSAVKGSWLLLSTHEEGCRYIPQQGDEVVYLRQGHQEYIEYSRKRESGPWVSLKEHLRAVEYCRVQSLEYSHVPGSGDSCCKMALQFVDPNSSVVGKTFKLTLPEVTSFPDFLVERTRFDAAIQRNWTRRDKCRVWWKNEDNSSGNWWEGRIQFVKAKSSEFPDSPWERYSVRYKSDLSDEHLHSPWELFDADTQWEQPHIDDLARNKLLSALTKVQQSGNTVQDRYGLHELEKISNKSKFTNRFPVPVSIELIQSRLENSYYRSLEALKHDVSILLSNANSFFEKDAEMTTKIKRLTEWFAKTLSSL* 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3767 1732 MobiDBLite consensus disorder prediction 986 1027 - -
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats profile. 389 421 IPR001680 GO:0005515
Mal4g3767 1732 MobiDBLite consensus disorder prediction 801 815 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 369 389 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 953 971 - -
Mal4g3767 1732 PANTHER WD REPEAT DOMAIN 9 23 1732 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1136 1162 - -
Mal4g3767 1732 ProSitePatterns Trp-Asp (WD) repeats signature. 599 613 IPR019775 -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1373 1401 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1216 1242 - -
Mal4g3767 1732 Pfam Bromodomain 1665 1717 IPR001487 GO:0005515
Mal4g3767 1732 SMART WD40_4 318 360 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 433 498 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 572 612 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 276 315 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 383 421 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 234 273 IPR001680 GO:0005515
Mal4g3767 1732 SMART WD40_4 531 569 IPR001680 GO:0005515
Mal4g3767 1732 MobiDBLite consensus disorder prediction 784 971 - -
Mal4g3767 1732 Gene3D - 391 459 IPR015943 GO:0005515
Mal4g3767 1732 SUPERFAMILY Bromodomain 1665 1730 IPR036427 GO:0005515
Mal4g3767 1732 CDD Bromo_WDR9_I_like 1604 1732 - -
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats profile. 283 324 IPR001680 GO:0005515
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1183 1285 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 847 867 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 922 951 - -
Mal4g3767 1732 PANTHER PH-INTERACTING PROTEIN-LIKE ISOFORM X1 23 1732 - -
Mal4g3767 1732 CDD WD40 237 612 - -
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats profile. 579 613 IPR001680 GO:0005515
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 241 276 - -
Mal4g3767 1732 SUPERFAMILY WD40 repeat-like 232 656 IPR036322 GO:0005515
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1000 1027 - -
Mal4g3767 1732 MobiDBLite consensus disorder prediction 870 888 - -
Mal4g3767 1732 Gene3D - 1633 1732 IPR036427 GO:0005515
Mal4g3767 1732 Pfam WD domain, G-beta repeat 236 273 IPR001680 GO:0005515
Mal4g3767 1732 Pfam WD domain, G-beta repeat 321 360 IPR001680 GO:0005515
Mal4g3767 1732 Pfam WD domain, G-beta repeat 280 314 IPR001680 GO:0005515
Mal4g3767 1732 Pfam WD domain, G-beta repeat 392 421 IPR001680 GO:0005515
Mal4g3767 1732 Pfam WD domain, G-beta repeat 573 612 IPR001680 GO:0005515
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats profile. 325 369 IPR001680 GO:0005515
Mal4g3767 1732 Gene3D - 481 670 IPR015943 GO:0005515
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 283 316 - -
Mal4g3767 1732 Gene3D - 217 390 IPR015943 GO:0005515
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 325 360 - -
Mal4g3767 1732 ProSiteProfiles Bromodomain profile. 1672 1715 IPR001487 GO:0005515
Mal4g3767 1732 MobiDBLite consensus disorder prediction 1250 1280 - -
Mal4g3767 1732 ProSiteProfiles Trp-Asp (WD) repeats profile. 241 282 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3767 Mal-Chr4 110501261 110520066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3767 233 421 Miscellaneous Gene Families AT5G08390 23.684 6.22e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3767 K11797 - gmx:100818665 2757.63