Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3725 ATGGGTGTTTTCAATTTTGAGGATGAAACCACCTCAATTGTTGCTCCTGCTACACTTTACAAAGCTCTAGTGATTGATGCTGACATCCTTACCCCAAAGGTTATTGATGCCATCAAAAGTATTGAAATTGTTGAAGGAAATGGTGGGGCTGGAACCATAAAAAAACTCACTTTCGTTGAAGATGGTGAAACCAAGTATGTGTTGCACAAAGTGGACTTAATAGATGAAGCTAACCTGGCTTACCACTACAGCATAGTTGGAGGTGTTGGTCTTCCAGACACAGTAGAGAAGATCTCATTTGAGGCTAAATTGGCTGCAAGCCCAAATGGAGGATCAATTGCAAAGTTGAGTGTGAAATACTTCACCAAAGGTGATGTTACACCAAGTGAAGAGGAACTCAAGGGTGGCAAAGCCAGGGGTGATGGTCTTTTCAAGGCCCTTGAGGGTTATTGTTTGGCTAATCCTGATTACAACTAA 477 0.4193 MGVFNFEDETTSIVAPATLYKALVIDADILTPKVIDAIKSIEIVEGNGGAGTIKKLTFVEDGETKYVLHKVDLIDEANLAYHYSIVGGVGLPDTVEKISFEAKLAASPNGGSIAKLSVKYFTKGDVTPSEEELKGGKARGDGLFKALEGYCLANPDYN* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3725 158 PANTHER - 1 157 - -
Mal4g3725 158 CDD Bet_v1-like 4 150 - -
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 SUPERFAMILY Bet v1-like 2 158 - -
Mal4g3725 158 PANTHER ABA-RESPONSIVE PROTEIN 1 157 - -
Mal4g3725 158 Pfam Pathogenesis-related protein Bet v 1 family 1 153 IPR000916 GO:0006952
Mal4g3725 158 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 88 120 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3725 158 Gene3D - 2 158 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3725 Mal-Chr4 109651277 109653573 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3725 - - gmx:100500525 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3725 4 109651277 109653573 Mal4g3725 4 109651277 109653573 ECH