Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3712 ATGGATGCCGGGACATTCGCCGTGGAGTTCACTAGCACCGTCGAAGCAGGGAGGATGTTCAAGGCTTTGATCCTTGATGGACCAAACCTCATCCCTAAGCTTTTGCCAGCTATAAAGAATATTCAACTTGTTGAAGGCAATGGAGGCCCCGGAAGCATTCAAGAGATAACCATTGTTGAAGGTGCTAACATCAAACATGTGAAGCATAGAATTGATGCAATAGACAAAGATAATTTGATATATAAGTATGCAGTGATCGAGGGGGGTGGTAAGCCGGAAATGCTCGAATCGGTTTCATATGAGGTCAAGATTGAGCCAAGTACAAAGGGTGGTTGCAACATCAAGAGTGTTAGCAAGTATCATCCAAAAAAAGGGGTTGAGATCAAAGATGAGGATTTGAAGGATGCCAAGGAGGAAGCATTGGTTATTCTCAAGGTAGTTGATGCGTATCTTGTGTCAAACCCAGAAGCCTATGCTTGA 480 0.4375 MDAGTFAVEFTSTVEAGRMFKALILDGPNLIPKLLPAIKNIQLVEGNGGPGSIQEITIVEGANIKHVKHRIDAIDKDNLIYKYAVIEGGGKPEMLESVSYEVKIEPSTKGGCNIKSVSKYHPKKGVEIKDEDLKDAKEEALVILKVVDAYLVSNPEAYA* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3712 159 Gene3D - 3 157 IPR023393 -
Mal4g3712 159 PANTHER - 1 159 - -
Mal4g3712 159 SUPERFAMILY Bet v1-like 5 157 - -
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Mal4g3712 159 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 159 - -
Mal4g3712 159 CDD Bet_v1-like 4 151 - -
Mal4g3712 159 Pfam Pathogenesis-related protein Bet v 1 family 3 153 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3712 Mal-Chr4 109559336 109560251 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3712 - - pvu:PHAVU_009G252400g 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g4876 5 121968608 121969685 Mal4g3712 4 109559336 109560251 PCT