Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3617 ATGGCCATGGCATCTGTGGCTCAACAACTGACAAGCACAAAATGGACACCACTCCTATGGAAACCAACAACAACACAATCACACAAACAAAGACGCCCTGGTATTGTATGTTCCATTGCAATTTCAAGCGCACGGAACAAAGACAGAGCAAAGCTTAAAGAGCTTTTTGAAGATGCTTATGAACGATGCCGCACTGCTCCAATGGAAGGTGTTTCTTTCACTCTTGATCAATTCACTGAAGCTCTTGAAAAATTTGATTTTGAGTCTGCAATTGGGACCAAGGTTAAGGGCACTGTGTTTGGCACTGATAATAGTGGAGCTTTTGTTGACATTAGTTCAAAGTCCACGGCTTACTTGCCGCTGCGAGAGGCATGCATCCACAAACTTAAGCGCGTAGAAGATGCAGGCATAATTCCTGGCATGAAAGAGGAATTTGTAATTATTGGTAAAAATGAAATTGATGATGGTATGATCTTGAGTTTAAGATCTATCCAGTATGACCTTGCATGGGAACGGTGTAGGCAACTTCAAGCAGAAGATTCTGTTGTGAAGGATTATTGA 561 0.4189 MAMASVAQQLTSTKWTPLLWKPTTTQSHKQRRPGIVCSIAISSARNKDRAKLKELFEDAYERCRTAPMEGVSFTLDQFTEALEKFDFESAIGTKVKGTVFGTDNSGAFVDISSKSTAYLPLREACIHKLKRVEDAGIIPGMKEEFVIIGKNEIDDGMILSLRSIQYDLAWERCRQLQAEDSVVKDY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3617 186 Pfam S1 RNA binding domain 90 162 IPR003029 GO:0003676
Mal4g3617 186 Gene3D - 74 174 IPR012340 -
Mal4g3617 186 ProSiteProfiles S1 domain profile. 92 162 IPR003029 GO:0003676
Mal4g3617 186 PANTHER 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC 28 184 - -
Mal4g3617 186 PANTHER 30S RIBOSOMAL PROTEIN S1 28 184 - -
Mal4g3617 186 SUPERFAMILY Nucleic acid-binding proteins 87 183 IPR012340 -
Mal4g3617 186 SMART S1_6 90 162 IPR022967 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3617 K02945 - gmx:100806905 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3617 4 106825310 106827125 Mal4g3617 4 106825310 106827125 ECH