Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3569 ATGCCAGATTGTGTGAAGAGTCATATTAAAGGGAAAACAGATGAGCAAAACGAGGTGCCAGGGCCGCTTTTCAGACCTAATGGAGCTTCACTATTTATGTCCTCCAGAATATCCTGTATAAGATTGGGTCCAAATTTATCCCCTCATGCTGCGAATGATAGTCCAATTGTTGGAAATGCATTATTTACTACTCTGGGATCAGAAACATCAGGTGGATCTGTTTATACCATCAGTCTTGTTGATCCAATAGATCTTGGACCAGGAATACTGAACACTTGGAGTAGACTAGAGGAAATAACTTCTTTCAAGTGTACCCTTTGGACAGCTGAATACGACTATAATAGACATCGGGCTATAATTGGTACTAATCAGGGAGGTGCTTCGGTGGATTTGGAAAGAGGGACAAGGTCATGGTTTTTACGTTGTAAAAGTGATGTTTTTGCTCAACAGATTGTTGATTCAGGAAATGTGATTTTGTGTGGACTCAGAAATGGGGCAGTCGTCTCGGTAGATTTTCGAGAGCAAAGATTGCTTTCTAGTAGACTTACTGAGCATAGGATATCATATGTATCTTCAGATAAGAAAGTTGGAAGTTCTAAAAAAGATTGGTTCAAGCTTCAAGGAAGCATATATCCTTCACATACCATTAAGATGCCTTCATCTATATCCAGTTTGGCATCACTTCAATTTGATGATCAGTACTTCTTGGCAAGCTCCATGGATGGATCGATAAGGCTATACGACCGTCGCATGCTCCAGAGGGGTTCGGTTCAATCTTATGAAGGGCACGTGAATTCCCATACTCAAATACAGCTCGGTGTTGACCCATATGAGAGATATGTTATGTCAGGTGGAGAGGATTGCAAGCTACGGATATGGAGTATCAAGTCTGGCGAATTGCTTTTGGAGGATAAGTTCTCTAATTCAGTTCTCTCCACTGTGTGCTATCAAACATATAATAGTAAATTCAAACCAGAGGAAGAAAACCAATACACGCCAGACTCTTCTTTGGGTGCATGGCTTGGATCTCATGAAGGACTATTTTATATGCACTGGTTATGA 1062 0.4077 MPDCVKSHIKGKTDEQNEVPGPLFRPNGASLFMSSRISCIRLGPNLSPHAANDSPIVGNALFTTLGSETSGGSVYTISLVDPIDLGPGILNTWSRLEEITSFKCTLWTAEYDYNRHRAIIGTNQGGASVDLERGTRSWFLRCKSDVFAQQIVDSGNVILCGLRNGAVVSVDFREQRLLSSRLTEHRISYVSSDKKVGSSKKDWFKLQGSIYPSHTIKMPSSISSLASLQFDDQYFLASSMDGSIRLYDRRMLQRGSVQSYEGHVNSHTQIQLGVDPYERYVMSGGEDCKLRIWSIKSGELLLEDKFSNSVLSTVCYQTYNSKFKPEEENQYTPDSSLGAWLGSHEGLFYMHWL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3569 353 PANTHER KATANIN P80 SUBUNIT 4 351 - -
Mal4g3569 353 SMART WD40_4 209 248 IPR001680 GO:0005515
Mal4g3569 353 SMART WD40_4 253 294 IPR001680 GO:0005515
Mal4g3569 353 MobiDBLite consensus disorder prediction 1 15 - -
Mal4g3569 353 MobiDBLite consensus disorder prediction 1 21 - -
Mal4g3569 353 Gene3D - 92 343 IPR015943 GO:0005515
Mal4g3569 353 ProSiteProfiles Trp-Asp (WD) repeats profile. 260 303 IPR001680 GO:0005515
Mal4g3569 353 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 4 351 - -
Mal4g3569 353 SUPERFAMILY WD40 repeat-like 71 315 IPR036322 GO:0005515
Mal4g3569 353 Pfam WD domain, G-beta repeat 212 248 IPR001680 GO:0005515
Mal4g3569 353 Pfam WD domain, G-beta repeat 257 294 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3569 233 305 Miscellaneous Gene Families AT5G08390 30.137 5.88e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3569 K11799 - gmx:100798753 559.296