Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3565 ATGAAACCCTGCATGGTTTTTCTCTTTGTCTTGTTCTTTCTTCATACCTATGTTCAAGCTCGTTTTGTGGTGGAGAAAAACAGCATCACGGTTCTGTCACCACATAAACTAAGAGGTAAACAAGATGGTGCTATAGGAAACTTTGGTATACCAAATTATGGAGGGTATATTGTAGGATCACTTGTTTATCCTGAAAAAGGCTCTCATGGTTGTCAAGTCTTTGAAGGTGATAAGCCTTTTAAGTTTCAGTTTCATCGTCCTACTATTGTTCTTCTTGATCGTGGAGAGTGTTATTTTGCCTTAAAGGTATGGCATGCTCAACTAGCTGGAGCTGCAGCAGTTTTAGTGGCTGACAGCATGGATGAGTCACTGATAACTATGGATTCTCCTGAGGAGAGCACCGATGCCGAAGGCTACATAGAAAAGATTGTAATTCCATCAGTACTAGTAGAGAAAGCCTTTGGTGATTCATTGAAAGAAGCTTTAAACAACAAAGATGAAGTTTTGCTAAGAATAGATTGGAGGGAATCAGTACCTCACCCTGATAATCGAGTCGAGTATGAGTTCTGGACTAACAGCAACGACGAATGTGGTGCACGTTGCGATGAACAGATGAATTTTGTGAAGAATTTCAAGGGTCATGCTCAGATTCTTGAGAGAGGTGGATATACACTGTTCACTCCACACTATATAACATGGTTTTGTCCAAAGCCATTTGTTGAAAGCAGTCAGTGCAAGTCTCAATGTATAAACCGCGGAAGATATTGTGCGCCGGATCCAGAGAAGGATTTTGCTGAGGGATATGAAGGGAAGGATATAGTGTATGAGAATTTGAGGCAGCTTTGTGTTCATAGAGTAGCGAACGAGAGCAGTCGTTCGTGGGTTTGGTGGGATTATGTAACAGATTTTCATGTTAGATGTTCCATGAAGGAGAAAAAATACAGCAAAGATTGTGCTGAAGCTGTCATGAAATCATTAGATCTTCCTATTGAGAAAATTAAGAAATGTGTTGGTGACCCTGAAGCTGATGTGGAGAATGAAGTGCTAAAGATTGAACAAACATCACAGATTGGAGGAGGATCTCGTGGCGATGTCACCATTTTGCCAACATTGGTGTTAAACAATGTCCAGTATAGAGGAAAATTGGAGAGAACATCTGTCTTGAAGGCTATATGTGCTGGATTTAAGGAGACTACTGAACCTCAAGTCTGTTTAAGTGGAGATATTGAAACTAATGAGTGTCTCGAAAGAAACGGAGGATGCTGGGAAGACAGAAATGCTAACGTAACTGCTTGCATGGATACTTTCCGAGGAAGAGTTTGTGAGTGTCCTGTTGTGAAAGGTGTTCAATATAGGGGTGATGGTTATACAACATGTGAAGCTTTTGGACCTGCAAGATGTTCTTTAAACAATGGAGGTTGCTGGTCAGAAACTAGAAATAAAATTACCTTCTCCGCTTGTTCAGAATCAAAGGTAAATGGTTGTCACTGCCCAGTTGGATTTCACGGAGACGGAAATAGTAAATGTGAAGATGTTGATGAATGTAAGGAAAAAAGTGCTTGTCAATGTGATGGTTGCAGTTGTAAGAACACTTGGGGTAGTTATGATTGTAAGTGCAAAGGAGGTCTTCTATATATGAAGGACCAAGATATTTGTATTGAAAGAAGTGGATCCAAATTTGGAAAGGTCATTGCCTTTGTGGTCATAGCAGTTGTTGTGGGAGCTGGTCTAGCTGGTTACGTATTCTACAAATATAGACTAAGGTCTTACATGGATTCGGAGATTATGGCTATCATGTCACAATACATGCCACTCGACCAGCAAAATAATGTAGTTCATGCTGAATCCGAGCCTTTACGACAAGGCAATGTGTAA 1875 0.4043 MKPCMVFLFVLFFLHTYVQARFVVEKNSITVLSPHKLRGKQDGAIGNFGIPNYGGYIVGSLVYPEKGSHGCQVFEGDKPFKFQFHRPTIVLLDRGECYFALKVWHAQLAGAAAVLVADSMDESLITMDSPEESTDAEGYIEKIVIPSVLVEKAFGDSLKEALNNKDEVLLRIDWRESVPHPDNRVEYEFWTNSNDECGARCDEQMNFVKNFKGHAQILERGGYTLFTPHYITWFCPKPFVESSQCKSQCINRGRYCAPDPEKDFAEGYEGKDIVYENLRQLCVHRVANESSRSWVWWDYVTDFHVRCSMKEKKYSKDCAEAVMKSLDLPIEKIKKCVGDPEADVENEVLKIEQTSQIGGGSRGDVTILPTLVLNNVQYRGKLERTSVLKAICAGFKETTEPQVCLSGDIETNECLERNGGCWEDRNANVTACMDTFRGRVCECPVVKGVQYRGDGYTTCEAFGPARCSLNNGGCWSETRNKITFSACSESKVNGCHCPVGFHGDGNSKCEDVDECKEKSACQCDGCSCKNTWGSYDCKCKGGLLYMKDQDICIERSGSKFGKVIAFVVIAVVVGAGLAGYVFYKYRLRSYMDSEIMAIMSQYMPLDQQNNVVHAESEPLRQGNV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3565 624 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 7 601 - -
Mal4g3565 624 PANTHER EGF-LIKE CALCIUM-BINDING DOMAIN, PA DOMAIN-CONTAINING PROTEIN-RELATED 7 601 - -
Mal4g3565 624 Gene3D - 19 181 - -
Mal4g3565 624 Pfam PA domain 59 158 IPR003137 -
Mal4g3565 624 Gene3D Laminin 465 549 - -
Mal4g3565 624 Gene3D Laminin 404 460 - -
Mal4g3565 624 SMART egfca_6 511 553 IPR001881 GO:0005509
Mal4g3565 624 CDD EGF_CA 511 542 - -
Mal4g3565 624 ProSitePatterns Calcium-binding EGF-like domain signature. 511 537 IPR018097 GO:0005509
Mal4g3565 624 SUPERFAMILY PA domain 88 123 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3565 Mal-Chr4 105429987 105435179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3565 5 621 Miscellaneous Gene Families AT1G30900 69.530 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3565 - - gmx:100790467 1136.32