Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3542 ATGGCTTTCACTTTCACGTTCTTTCATTCTTTCAGCTTGTTCTTGTATCTCATCCTATCAACCCCTTCTTCATGTTCTTCTTTGTTTTCTGGAATTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCAGTGGCAAGGCTTGTTGAGCTTGGAAAGGTTAGTGATGCTAGTGGCTATTTAGAGAGGACATTTTTGAGTCCTGCATCCACGAGGGCGATTAGTCTTATTCGAAAATGGATGGAAGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACATGGTAGAGTTGAGGGTGCAAACACAAATGCAGAAGCTTTATTGGTTGGATCTCACATGGACACTGTTGTTGATGCTGGTAAATTTGATGGAGCACTAGGAATAGTCTCTGCAATATCTGCATTGAAAGTTATGCATGTCAATGGAAAGCTGCAAAAGCTAAGCCGTCCTGTTGAGGTGATTGCATTTTGTGATGAAGAGGGTGTGAGATTTCAAACTACTTTCTTAGGCAGTGGTGCTATAGCTGGTATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGAAATGTAACGGTAAAAGATGTTCTTAAAGAGAACTCGATAGAAGCTGCGGAGGATATGTTTTTGCAGCTCAAGTATGATCCAAAATCTGTTTGGGGTTATGTCGAGCTTCACATTGAGCAGGGTCCTGTGCTAGAACAAGTTGGTTTCCCACTTGGTGTCGTTAAAGGCATAGCTGGGCAGACAAGATTGAAGGTTACGGTTAGAGGCTCGCAAGGTCATGCCGGAACTGTTCCAATGTCCATGCGCCAAGATCCTATGATGGCTGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGCAAACATCCTGAAGAATACCTTTCTTACGATGATCGTTGCAGCGATTCATCGATAAAATCACTTTCAAGTTCACTTGTTTGTACTGTTGGTGAAATATCAACATGGCCAAGTGCTAGTAATGTCATTCCAGGCCAGGTTACATATACCGTGGATATACGAGCAATTGATGATCTTGGACGTGAGGCTGTCATATATGATTTATCCAATCGAATTTATAAGATATGTGACAAGCGTTCAGTTTCCTGCATTATTGAACACAAGCATGATGCAGGTGCTGTGATTTGTGATCCTGAACTCAGTTCACAGCTGAAGTCTGCAGCTTATTCTGCACTCAAGAGAATGGAGGGTGACATTCAAGATGAAGTACCAACATTAATGAGTGGAGCAGGGCATGATGCCATGGCAATGTCTCACTTAACAAAGGTTGGGATGCTGTTTGTGCGTTGTCGCGGTGGCATAAGTCACTCTCCACAAGAGGATGTGCTAGACGATGATGTTTGGGCGGCCGGTTTAGCAACCTTATCATTTCTGGAAAATCTATAA 1443 0.4248 MAFTFTFFHSFSLFLYLILSTPSSCSSLFSGIETGDLEKRGDLFPQILRDEAVARLVELGKVSDASGYLERTFLSPASTRAISLIRKWMEDAGLRTWVDQMGNVHGRVEGANTNAEALLVGSHMDTVVDAGKFDGALGIVSAISALKVMHVNGKLQKLSRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLEISDKRNVTVKDVLKENSIEAAEDMFLQLKYDPKSVWGYVELHIEQGPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMMAAAEQIVLMESLCKHPEEYLSYDDRCSDSSIKSLSSSLVCTVGEISTWPSASNVIPGQVTYTVDIRAIDDLGREAVIYDLSNRIYKICDKRSVSCIIEHKHDAGAVICDPELSSQLKSAAYSALKRMEGDIQDEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPQEDVLDDDVWAAGLATLSFLENL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3542 480 CDD M20_bAS 53 478 - -
Mal4g3542 480 SUPERFAMILY Bacterial exopeptidase dimerisation domain 259 391 IPR036264 -
Mal4g3542 480 Pfam Peptidase family M20/M25/M40 119 469 IPR002933 GO:0016787
Mal4g3542 480 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 118 127 IPR001261 -
Mal4g3542 480 PANTHER ALLANTOATE DEIMINASE-RELATED 41 474 - -
Mal4g3542 480 Gene3D Zn peptidases 63 470 - -
Mal4g3542 480 SUPERFAMILY Zn-dependent exopeptidases 44 480 - -
Mal4g3542 480 Gene3D - 259 391 - -
Mal4g3542 480 TIGRFAM hydantase: amidase, hydantoinase/carbamoylase family 53 304 IPR010158 GO:0016813
Mal4g3542 480 Pfam Peptidase dimerisation domain 259 373 IPR011650 -
Mal4g3542 480 PANTHER ALLANTOATE DEIMINASE-RELATED 41 474 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3542 Mal-Chr4 104809725 104813616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3542 K02083 - gmx:100819399 819.305